DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38a and SRPK

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001369087.1 Gene:SRPK / 36706 FlyBaseID:FBgn0286813 Length:1009 Species:Drosophila melanogaster


Alignment Length:173 Identity:52/173 - (30%)
Similarity:81/173 - (46%) Gaps:30/173 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 EDC--ELRILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYDQTVDIWSVGCIMAELITRRTL 226
            ::|  .::|.|.|.|...:...|..:.||.||:.|:::. ..|:.:.||||..|::.||.|...|
  Fly   597 DECNVHVKIADLGNACWVDRHFTEDIQTRQYRSLEVIIG-AGYNTSADIWSTACMVFELATGDYL 660

  Fly   227 FP---------GTDHIHQLNLIMEMLGTPPAEFLKKISSESARSY-----IQSLPPMKGRSFKNV 277
            |.         ..||:..   |:|:||..|.|.|.. .:.:|:|:     ::::..:|.....:|
  Fly   661 FEPHSGESYTRDEDHLAH---IIELLGPIPREILLN-GTYAAKSFTRSCELRNISGLKPWGLMDV 721

  Fly   278 F--------KNANPLAIDLLEKMLELDAEKRITAEEALSHPYL 312
            .        |:|...| ..|..|||.|..||.||.|.|.||:|
  Fly   722 LLEKYEWSQKDAASFA-SFLTPMLEFDPNKRATAAECLQHPWL 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 52/173 (30%)
S_TKc 25..312 CDD:214567 51/171 (30%)
SRPKNP_001369087.1 PKc_like 159..>318 CDD:419665
PKc_like <600..763 CDD:419665 50/168 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24055
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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