DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38a and p38b

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster


Alignment Length:355 Identity:285/355 - (80%)
Similarity:322/355 - (90%) Gaps:0/355 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KFYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYRE 72
            |||||||||||||||:.||:|||||.||||||.|||||||:..||||||||||||||||||||||
  Fly     7 KFYKLDINRTEWEIPETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRE 71

  Fly    73 LRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDHVQFLVYQ 137
            |||||||||||||||||:|||.....||:.|||||:||||||||||||||.|.||||||||||||
  Fly    72 LRLLKHMDHENVIGLLDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRTQKLSDDHVQFLVYQ 136

  Fly   138 ILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENEMTGYVATRWYRAPEIMLNWM 202
            |||||||||||||||||||||||||||||||||||||||||.|:|||||||||||||||||||||
  Fly   137 ILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPAESEMTGYVATRWYRAPEIMLNWM 201

  Fly   203 HYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLP 267
            ||:||.||||||||||||:|.||||||||||||||||||:||||..||:.:|||||||:||:|||
  Fly   202 HYNQTADIWSVGCIMAELLTGRTLFPGTDHIHQLNLIMEVLGTPADEFMSRISSESARNYIRSLP 266

  Fly   268 PMKGRSFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSPPYDHSFE 332
            .|..|:|:::|:.|||||||||||||||||:||||||:||:|||:|||.:|:.|||:..||.|||
  Fly   267 VMPRRNFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDPTDEQTAALYDQSFE 331

  Fly   333 DMDLPVDKWKELIYKEVTNFKPPPSYAQVL 362
            :.:|||:||:|:::.|||.|||..::|::|
  Fly   332 ENELPVEKWREMVFSEVTAFKPTAAFAELL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 280/344 (81%)
S_TKc 25..312 CDD:214567 243/286 (85%)
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 280/344 (81%)
S_TKc 24..311 CDD:214567 243/286 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442177
Domainoid 1 1.000 310 1.000 Domainoid score I310
eggNOG 1 0.900 - - E1_KOG0660
Homologene 1 1.000 - - H31777
Inparanoid 1 1.050 512 1.000 Inparanoid score I1274
Isobase 1 0.950 - 0 Normalized mean entropy S378
OMA 1 1.010 - - QHG53505
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 1 1.000 - - mtm6418
orthoMCL 1 0.900 - - OOG6_102675
Panther 1 1.100 - - P PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X352
1413.760

Return to query results.
Submit another query.