DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38a and rl

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:342 Identity:159/342 - (46%)
Similarity:225/342 - (65%) Gaps:12/342 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 WEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYRELRLLKHMDHEN 83
            :|:...|..|..:|.||||.|..|....||..|||||:: ||:...:.:||.||:.:|....|||
  Fly    32 FEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKIS-PFEHQTYCQRTLREITILTRFKHEN 95

  Fly    84 VIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDHVQFLVYQILRGLKYIHSA 148
            :|.:.||...    .|::..:.||:|..||:.||..:::.|.||:||:.:.:|||||||||||||
  Fly    96 IIDIRDILRV----DSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSA 156

  Fly   149 GVIHRDLKPSNIAVNEDCELRILDFGLARPTENE------MTGYVATRWYRAPEIMLNWMHYDQT 207
            .|:||||||||:.:|:.|:|:|.||||||..:.|      :|.|||||||||||||||...|.::
  Fly   157 NVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 221

  Fly   208 VDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPPMKGR 272
            :||||||||:||:::.|.:|||..::.|||.|:.:||:|..:.|:.|.:|.||:|::|||.....
  Fly   222 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLESLPFKPNV 286

  Fly   273 SFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSP-PYDHSFEDMDL 336
            .:..:|.||:.||:|||.|||..:..|||..||||:|||||:|.:|..|..:. |:..:.|:.|:
  Fly   287 PWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAEVPFRINMENDDI 351

  Fly   337 PVDKWKELIYKEVTNFK 353
            ..|..|.||::|...||
  Fly   352 SRDALKSLIFEETLKFK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 159/342 (46%)
S_TKc 25..312 CDD:214567 142/292 (49%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 157/338 (46%)
S_TKc 38..326 CDD:214567 142/292 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442165
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34458at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2432
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.