DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38a and Mapk13

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_062104.3 Gene:Mapk13 / 29513 RGDID:3045 Length:366 Species:Rattus norvegicus


Alignment Length:355 Identity:205/355 - (57%)
Similarity:264/355 - (74%) Gaps:5/355 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVSITKKFYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVH 65
            ||:...:.|||.|||:|.||:|..|.....|||||||.|..|:.:.|...||||||:|||||.:.
  Rat     1 MSLIRKRGFYKQDINKTAWELPKTYLAPAHVGSGAYGAVCSAIDKRTGEKVAIKKLSRPFQSEIF 65

  Fly    66 AKRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDH 130
            |||.||||.|||||.|||||||||::.|..   |:.|||..|||...|..||..|:.|: .|::.
  Rat    66 AKRAYRELLLLKHMHHENVIGLLDVYTPAT---SVRNFQDFYLVMPFMQTDLQKIMGME-FSEEK 126

  Fly   131 VQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENEMTGYVATRWYRAP 195
            ||:||||:|:|||||||||::||||||.|:||||||||:||||||||.|:.||||||.|||||||
  Rat   127 VQYLVYQMLKGLKYIHSAGIVHRDLKPGNLAVNEDCELKILDFGLARHTDAEMTGYVVTRWYRAP 191

  Fly   196 EIMLNWMHYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESAR 260
            |::|:||||:||||||||||||||::|.:|||.|.|::.||..|:::.|.|.|||::|:..::|:
  Rat   192 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAK 256

  Fly   261 SYIQSLPPMKGRSFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVE-QTS 324
            |||||||....:.|..:|..|:|.|:|||:||||||.:||:||.:||:||:.|.:.:|..| :..
  Rat   257 SYIQSLPQSPKKDFTQLFPRASPQAVDLLDKMLELDVDKRLTAAQALAHPFFEPFRDPEEETEAQ 321

  Fly   325 PPYDHSFEDMDLPVDKWKELIYKEVTNFKP 354
            .|:|.:.|...|.||:||:.||||:.||.|
  Rat   322 QPFDDALEREKLSVDEWKQHIYKEIANFSP 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 202/345 (59%)
S_TKc 25..312 CDD:214567 175/286 (61%)
Mapk13NP_062104.3 STKc_p38delta 9..351 CDD:143384 202/345 (59%)
TXY 180..182 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X352
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.880

Return to query results.
Submit another query.