DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38a and pmk-1

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_501365.1 Gene:pmk-1 / 191743 WormBaseID:WBGene00004055 Length:377 Species:Caenorhabditis elegans


Alignment Length:363 Identity:214/363 - (58%)
Similarity:275/363 - (75%) Gaps:17/363 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYREL 73
            :|.:::||:.|.:|:.|.:|.|:|:||||.|..|....:...|||||..|||||.:||:||||||
 Worm    19 YYVVELNRSVWVVPNYYINLTPIGTGAYGTVCAAECTRSGTRVAIKKFNRPFQSIIHARRTYREL 83

  Fly    74 RLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDHVQFLVYQI 138
            |||:.|.|||:|.|||:|.|   |.::.:.:.||.|:.||.|||:||:::|.|:|||:|||||||
 Worm    84 RLLRCMCHENIIDLLDVFTP---NENVNDIEDVYFVSMLMGADLSNILKIQRLNDDHIQFLVYQI 145

  Fly   139 LRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENEMTGYVATRWYRAPEIMLNWMH 203
            ||||||||||.:||||||||||||||||||:||||||||.|::||||||||||||||||||||||
 Worm   146 LRGLKYIHSADIIHRDLKPSNIAVNEDCELKILDFGLARQTDSEMTGYVATRWYRAPEIMLNWMH 210

  Fly   204 YDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPP 268
            |.||||:||||||:|||||.:|||||:|||.||..||.:.|||..|||||||||.||:||::||.
 Worm   211 YTQTVDVWSVGCILAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIRNLPK 275

  Fly   269 MKGRSFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSPPYDHSFED 333
            |..|.||.:|..|.|.|||||||||.||.::|.||:||:.|.||..|.:.:.|..:       |:
 Worm   276 MTRRDFKRLFAQATPQAIDLLEKMLHLDPDRRPTAKEAMEHEYLAAYHDETDEPIA-------EE 333

  Fly   334 MDL-------PVDKWKELIYKEVTNFKPPPSYAQVLKD 364
            |||       .:|:||::|::|:::|:...::|...:|
 Worm   334 MDLNDDVRADTIDEWKKIIWEEISDFQKNVAFADEEED 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 212/351 (60%)
S_TKc 25..312 CDD:214567 193/286 (67%)
pmk-1NP_501365.1 STKc_p38 19..361 CDD:143356 212/351 (60%)
S_TKc 35..319 CDD:214567 193/286 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157467
Domainoid 1 1.000 404 1.000 Domainoid score I365
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31777
Inparanoid 1 1.050 453 1.000 Inparanoid score I897
Isobase 1 0.950 - 0 Normalized mean entropy S378
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 1 1.000 - - otm14777
orthoMCL 1 0.900 - - OOG6_102675
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X352
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.710

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