DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38a and pmk-3

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001379550.1 Gene:pmk-3 / 177610 WormBaseID:WBGene00004057 Length:474 Species:Caenorhabditis elegans


Alignment Length:378 Identity:163/378 - (43%)
Similarity:230/378 - (60%) Gaps:44/378 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKFYKLDINRTEWEIPDIYQDLQP-----VGSGAYGQVSK--AVVR-GTNMHVAIKKLARPFQSA 63
            ::|..:.|....:.||:.| |::|     :|.|::|.|.|  ||.| |...:|||||:..||...
 Worm    96 RRFQFVMIRNITFAIPEGY-DVEPNSIEYLGGGSFGNVIKTSAVCRDGLRRYVAIKKMREPFFDP 159

  Fly    64 VHAKRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQH--- 125
            .||:|.:||.:||:.|.|:|:|..|||:.|...|    :|:.||:||......|..|::.|.   
 Worm   160 HHARRIFRETKLLQLMRHDNIICALDIYTPDEEN----DFRDVYVVTEFAGRSLYQILKQQRDYG 220

  Fly   126 ---LSDDHVQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENE---MT 184
               |:|:|::|::|||:|.|||||||.:|||||||.|:|:.:|.:|.||||||||..|.:   :|
 Worm   221 RRVLTDEHIKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDSDLMILDFGLARSLEKKDTSLT 285

  Fly   185 GYVATRWYRAPEIMLNWM--HYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPP 247
            .||.|||||:||: :.|.  .|....|:||:|||.|||:|...||||.:...|...|.::.|:|.
 Worm   286 QYVQTRWYRSPEV-IYWKIDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPD 349

  Fly   248 AEFLKKI---SSESARSYIQSLPPMKGRSFKNVFKNANPLA--IDLLEKMLELDAEKRITAEEAL 307
            .|.|.||   :|.:.::.|||....|.|:|::||...||..  ||||||:|.||.|||||.|||:
 Worm   350 EELLTKIENDNSSAIKAVIQSYTTHKRRNFRDVFSAHNPSEDFIDLLEKLLVLDPEKRITVEEAI 414

  Fly   308 SHPYLEKYAEPSVEQTSPPYDHSFEDMDLPVD-------KWKELIYKEVTNFK 353
            .||||   ||.|:.:..|..||.| |:|   |       :|::.::||:.|:|
 Worm   415 QHPYL---AEFSLPEDEPRADHIF-DLD---DSQARTRFEWRDAVWKEIMNYK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 163/376 (43%)
S_TKc 25..312 CDD:214567 142/310 (46%)
pmk-3NP_001379550.1 STKc_p38 102..461 CDD:143356 162/372 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S378
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

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