DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38a and jnk-1

DIOPT Version :10

Sequence 1:NP_477163.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001021270.1 Gene:jnk-1 / 177460 WormBaseID:WBGene00002178 Length:463 Species:Caenorhabditis elegans


Alignment Length:373 Identity:164/373 - (43%)
Similarity:237/373 - (63%) Gaps:35/373 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVSITKKFYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHA 66
            |:.:.:.:|.:.|...:..:...||:|:.:||||.|.|..|.....|..||||||:||||:..||
 Worm    96 SIHVPENYYSVTIGEAQMVVLKRYQNLRLIGSGAQGIVCSAFDTVRNEQVAIKKLSRPFQNVTHA 160

  Fly    67 KRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDHV 131
            ||.||||:|:..::|:|:||:|:.|.|..   .|:.|..:|:|..||||:|..:|:|. |..:.:
 Worm   161 KRAYRELKLMSLVNHKNIIGILNCFTPQK---KLDEFNDLYIVMELMDANLCQVIQMD-LDHERL 221

  Fly   132 QFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENE---MTGYVATRWYR 193
            .:|:||:|.|::::||||:||||||||||.|..||.|:|||||||| |..|   ||.||.||:||
 Worm   222 SYLLYQMLCGIRHLHSAGIIHRDLKPSNIVVRSDCTLKILDFGLAR-TAIEAFMMTPYVVTRYYR 285

  Fly   194 APEIMLNWMHYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSES 258
            |||::|. |.|.:.||:||:|||..|||..|.||||.|||.|...|:|.||||...||::: ..:
 Worm   286 APEVILG-MGYKENVDVWSIGCIFGELIRGRVLFPGGDHIDQWTRIIEQLGTPDRSFLERL-QPT 348

  Fly   259 ARSYIQSLPPMKGRSFKNVFK-NANPL-----------AIDLLEKMLELDAEKRITAEEALSHPY 311
            .|:|:::.|..:...|:.:|. |..|:           |.|||.:||.:|.|:||:.::||.|||
 Worm   349 VRNYVENRPRYQATPFEVLFSDNMFPMTADSSRLTGAQARDLLSRMLVIDPERRISVDDALRHPY 413

  Fly   312 -------LEKYAEPSVEQTSPPYDHSFEDMDLPVDKWKELIYKEVTNF 352
                   :|.||.|.:     ||||:. |::..||.|:|.|::|:|::
 Worm   414 VNVWFDEIEVYAPPPL-----PYDHNM-DVEQNVDSWREHIFRELTDY 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_477163.1 STKc_p38 9..354 CDD:143356 163/366 (45%)
jnk-1NP_001021270.1 STKc_JNK 118..452 CDD:270840 159/346 (46%)

Return to query results.
Submit another query.