DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38a and jnk-1

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001021270.1 Gene:jnk-1 / 177460 WormBaseID:WBGene00002178 Length:463 Species:Caenorhabditis elegans


Alignment Length:373 Identity:164/373 - (43%)
Similarity:237/373 - (63%) Gaps:35/373 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVSITKKFYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHA 66
            |:.:.:.:|.:.|...:..:...||:|:.:||||.|.|..|.....|..||||||:||||:..||
 Worm    96 SIHVPENYYSVTIGEAQMVVLKRYQNLRLIGSGAQGIVCSAFDTVRNEQVAIKKLSRPFQNVTHA 160

  Fly    67 KRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDHV 131
            ||.||||:|:..::|:|:||:|:.|.|..   .|:.|..:|:|..||||:|..:|:|. |..:.:
 Worm   161 KRAYRELKLMSLVNHKNIIGILNCFTPQK---KLDEFNDLYIVMELMDANLCQVIQMD-LDHERL 221

  Fly   132 QFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENE---MTGYVATRWYR 193
            .:|:||:|.|::::||||:||||||||||.|..||.|:|||||||| |..|   ||.||.||:||
 Worm   222 SYLLYQMLCGIRHLHSAGIIHRDLKPSNIVVRSDCTLKILDFGLAR-TAIEAFMMTPYVVTRYYR 285

  Fly   194 APEIMLNWMHYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSES 258
            |||::|. |.|.:.||:||:|||..|||..|.||||.|||.|...|:|.||||...||::: ..:
 Worm   286 APEVILG-MGYKENVDVWSIGCIFGELIRGRVLFPGGDHIDQWTRIIEQLGTPDRSFLERL-QPT 348

  Fly   259 ARSYIQSLPPMKGRSFKNVFK-NANPL-----------AIDLLEKMLELDAEKRITAEEALSHPY 311
            .|:|:::.|..:...|:.:|. |..|:           |.|||.:||.:|.|:||:.::||.|||
 Worm   349 VRNYVENRPRYQATPFEVLFSDNMFPMTADSSRLTGAQARDLLSRMLVIDPERRISVDDALRHPY 413

  Fly   312 -------LEKYAEPSVEQTSPPYDHSFEDMDLPVDKWKELIYKEVTNF 352
                   :|.||.|.:     ||||:. |::..||.|:|.|::|:|::
 Worm   414 VNVWFDEIEVYAPPPL-----PYDHNM-DVEQNVDSWREHIFRELTDY 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 163/366 (45%)
S_TKc 25..312 CDD:214567 145/308 (47%)
jnk-1NP_001021270.1 STKc_JNK 118..452 CDD:270840 159/346 (46%)
S_TKc 119..414 CDD:214567 144/301 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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