DRSC/TRiP Functional Genomics Resources

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Protein Alignment p38a and mapk4

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:XP_004910415.1 Gene:mapk4 / 100498202 XenbaseID:XB-GENE-484178 Length:577 Species:Xenopus tropicalis


Alignment Length:326 Identity:114/326 - (34%)
Similarity:183/326 - (56%) Gaps:28/326 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVIGLLD 89
            :.|.:|:|.||.|.|..||....:..||:||:|  .......|...||:::::.::|:|::.:..
 Frog    20 FVDFKPLGFGANGLVLSAVDSKNSRRVAVKKIA--ISDGRSMKHALREIKIIRRLNHDNIVKVHA 82

  Fly    90 IFHPHPAN--GSLENFQQVYLVTHLMDADLNNIIRMQHLSDDHVQFLVYQILRGLKYIHSAGVIH 152
            :..|..|:  |.:..:..||:|...|:.||..::....|::||.:..:||:|||||||||..|:|
 Frog    83 VLGPRGADLQGDILKYNLVYIVQEHMETDLAQLLEQGPLTEDHAKLFMYQLLRGLKYIHSTNVLH 147

  Fly   153 RDLKPSNIAVN-EDCELRILDFGLARPTENEMT--GYVA----TRWYRAPEIMLNWMHYDQTVDI 210
            |||||:||.:: |:..|:|.||||||..:...:  ||::    |:|||:|.::|:..:|.:.:|:
 Frog   148 RDLKPANIFISTEELLLKIGDFGLARIVDQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM 212

  Fly   211 WSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPPMKGRSF- 274
            |:.|||:||::|.|.||.|:..:.|:.||::   |.|.     |..|.....::.:|.....|: 
 Frog   213 WAAGCILAEMLTGRMLFAGSHELEQMQLILD---TIPV-----IHEEDKEELLKVMPSFINASWE 269

  Fly   275 -----KNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSPPYDHSFEDM 334
                 :.:....|..|||.|||:|..:...|:|||.||.|||:..|:.|..|   |...|.|...
 Frog   270 VRKPLRKLLPEMNSEAIDFLEKILTFNPMDRLTAEAALQHPYMSPYSCPEDE---PISQHPFRIE 331

  Fly   335 D 335
            |
 Frog   332 D 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 114/326 (35%)
S_TKc 25..312 CDD:214567 106/301 (35%)
mapk4XP_004910415.1 STKc_MAPK4_6 14..351 CDD:143359 114/326 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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