DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p38a and mapk13

DIOPT Version :9

Sequence 1:NP_001163711.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster
Sequence 2:XP_031751532.1 Gene:mapk13 / 100144715 XenbaseID:XB-GENE-490713 Length:377 Species:Xenopus tropicalis


Alignment Length:356 Identity:205/356 - (57%)
Similarity:258/356 - (72%) Gaps:6/356 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVSITKKFYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVH 65
            ||.|:..||.|.::|:|.||||..|..|..|||||||.|..|:...|...||||||:|||||.:.
 Frog     1 MSSSVKCKFRKEEVNKTLWEIPLRYASLCLVGSGAYGSVCSAIDLKTGEKVAIKKLSRPFQSEIF 65

  Fly    66 AKRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQHLSDDH 130
            |||.:|||.|||||:|||||||||:|   .:..|..:|...|||...|..||..|:. .|||:|.
 Frog    66 AKRAFRELTLLKHMNHENVIGLLDVF---TSATSFNDFHNFYLVMPYMQIDLQKIMG-HHLSEDK 126

  Fly   131 VQFLVYQILRGLKYIHSAGVIHRDLKPSNIAVNEDCELRILDFGLARPTENEMTGYVATRWYRAP 195
            ||:||||:|.||||||:||:|||||||.|:||||||||:||||||||..:.||||||.|||||||
 Frog   127 VQYLVYQMLCGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 191

  Fly   196 EIMLNWMHYDQTVDIWSVGCIMAELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESAR 260
            |::||||||::|||||||||||.|::|.:|||.|.|::.||..|:::.|.|..||::|:...:|:
 Frog   192 EVILNWMHYNKTVDIWSVGCIMGEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFIQKLEDMAAK 256

  Fly   261 SYIQSLPPMKGRSFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSP 325
            .||||||.:..:.|..:|.||:.||:||||||||||.|||:||.|||.|||.:::.:...|..:|
 Frog   257 KYIQSLPKIPKKEFSLLFPNASDLAVDLLEKMLELDVEKRLTATEALEHPYFDEFHDADEETEAP 321

  Fly   326 PYDHSFEDMDLPVDKW--KELIYKEVTNFKP 354
            |||.|.|...|.|::|  ||..|:||.|:.|
 Frog   322 PYDDSLEGEKLSVEEWRSKEYTYEEVINYTP 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p38aNP_001163711.1 STKc_p38 9..354 CDD:143356 200/346 (58%)
S_TKc 25..312 CDD:214567 175/286 (61%)
mapk13XP_031751532.1 STKc_p38delta 9..352 CDD:143384 200/346 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324618at33208
OrthoFinder 1 1.000 - - FOG0000533
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X352
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.