DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kal1 and Wfdc18

DIOPT Version :9

Sequence 1:NP_651220.3 Gene:Kal1 / 42865 FlyBaseID:FBgn0039155 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_598221.2 Gene:Wfdc18 / 171059 RGDID:619957 Length:76 Species:Rattus norvegicus


Alignment Length:86 Identity:26/86 - (30%)
Similarity:36/86 - (41%) Gaps:20/86 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ILELQCLAKCGSNPTTKAGREQCLNKCIQELLLGP----RAGSCPKIGRQSRARLSCLDNCQYDH 119
            :|.|..|...|.|              |...|..|    :.|.|||  ...|:..:|::.|..|.
  Rat     6 VLLLVALIAVGMN--------------ITYALFSPTKLEKPGKCPK--NPPRSIGTCVELCSGDQ 54

  Fly   120 ECPEVQKCCPSSCGPMCVEPL 140
            .||.:||||.:.||.:|..|:
  Rat    55 SCPNIQKCCSNGCGHVCKSPV 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kal1NP_651220.3 WAP 96..139 CDD:278522 17/42 (40%)
fn3 <177..245 CDD:278470
fn3 279..343 CDD:278470
Wfdc18NP_598221.2 WAP 16..75 CDD:238120 22/74 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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