DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2f and AT5G06480

DIOPT Version :9

Sequence 1:NP_651219.1 Gene:Npc2f / 42864 FlyBaseID:FBgn0039154 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_196266.1 Gene:AT5G06480 / 830536 AraportID:AT5G06480 Length:153 Species:Arabidopsis thaliana


Alignment Length:117 Identity:26/117 - (22%)
Similarity:49/117 - (41%) Gaps:19/117 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 YQVSYLDIESCTTLPCSMARNATIKVTVRFDDNGNGVSF--LKHEVRWVFNYIKTQAAITPDPCD 115
            |:|...::: .:..|.:....||..::.   :.|..:||  |..||.:...::.::   |.|.|.
plant    36 YEVKVKEVD-ISPNPIAPGEPATFTISA---NTGREISFGKLVIEVSYFGWHVHSE---THDLCT 93

  Fly   116 GDHGCIESASGGKAYWANIFVNETLP--VMKGSMLWESK--DANDQNLICFQ 163
            .....|::.....|:      ::.||  ...||.|.:.|  ||..:.|.|.:
plant    94 ETSCPIQTGDFLVAH------SQVLPGYTPPGSYLLKMKMLDAKKKELTCIK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2fNP_651219.1 Npc2_like 46..166 CDD:238458 26/117 (22%)
AT5G06480NP_196266.1 PG-PI_TP 27..142 CDD:238459 26/117 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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