DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2f and Npc2g

DIOPT Version :9

Sequence 1:NP_651219.1 Gene:Npc2f / 42864 FlyBaseID:FBgn0039154 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001247375.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster


Alignment Length:147 Identity:29/147 - (19%)
Similarity:47/147 - (31%) Gaps:41/147 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FEDCGSLYQVSYLDIESCT-----TLPCSMA-RNATIKV------TVRFDDNGN-GVSFLKHEVR 97
            ||.|..       .:::||     ..||..| .||...:      .:.||...| ....|...:.
  Fly    28 FEPCPD-------SVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPNFDADTLVASLG 85

  Fly    98 WVFNYIKTQ-----------AAITPDPCDGDHGCIESASGGKAYWANIFVNETLPVMKGSMLWES 151
            |.    |::           ||....||....|..::      |...:.:....|:...::.|..
  Fly    86 WA----KSENVELPLLTLDSAACKYTPCPVRSGVKQT------YTTLVPIEAKFPLSPYTIRWAL 140

  Fly   152 KDANDQNLICFQVPVVI 168
            ||...|...||.:.:.:
  Fly   141 KDPVSQKRCCFTIDIKV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2fNP_651219.1 Npc2_like 46..166 CDD:238458 29/143 (20%)
Npc2gNP_001247375.1 Npc2_like 28..155 CDD:238458 29/143 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6567
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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