DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2f and npc2.1

DIOPT Version :9

Sequence 1:NP_651219.1 Gene:Npc2f / 42864 FlyBaseID:FBgn0039154 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_775331.1 Gene:npc2.1 / 282673 ZFINID:ZDB-GENE-021206-13 Length:149 Species:Danio rerio


Alignment Length:182 Identity:43/182 - (23%)
Similarity:69/182 - (37%) Gaps:54/182 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MDYYLKILLVICAAHELAGGTIKSTRDAVYKKYLSLRSLPFEDCGSL-YQVSYLDIESCTTLPCS 69
            |||  ::|.|:..:               :..|.....:.|.||||: .:|..:||:.|:..||.
Zfish     1 MDY--RVLGVVLLS---------------FLAYTCADPVKFVDCGSVDGKVVQVDIKPCSQQPCK 48

  Fly    70 MARNATIKVTVRFDDNGNGVSFLKHEVRWVFNYIKTQAAI---------TPDPCDGDHGCIESAS 125
            :.:..:..|.|.|   .:||.            .:|..|:         .|.|...|.||   .|
Zfish    49 LHKGQSYTVNVTF---SSGVE------------SQTSKAVVHGVLAGVPVPFPIPIDDGC---KS 95

  Fly   126 GGKA---------YWANIFVNETLPVMKGSMLWESKDANDQNLICFQVPVVI 168
            |.:.         |...:.|....|.:|..:.||.:|.:.::|.|.:.||.|
Zfish    96 GIQCPIVPQKPYNYVTELPVKTEYPAIKVVVEWELRDDSSKDLFCIKFPVQI 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2fNP_651219.1 Npc2_like 46..166 CDD:238458 34/138 (25%)
npc2.1NP_775331.1 Npc2_like 24..145 CDD:238458 34/138 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1612792at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.980

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