DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec10 and SEC10

DIOPT Version :9

Sequence 1:NP_651218.1 Gene:Sec10 / 42863 FlyBaseID:FBgn0266673 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_001031871.1 Gene:SEC10 / 831112 AraportID:AT5G12370 Length:825 Species:Arabidopsis thaliana


Alignment Length:799 Identity:184/799 - (23%)
Similarity:329/799 - (41%) Gaps:164/799 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TNNELQ------NSEDFHPV--ALHDTFIQTIKDLKILQEKQQSKCERLEESLRQEKESHAKKIA 83
            ||..|:      :|..|.|.  .|...|....|:|..|:::...:...|::.:..:...|.|.:.
plant    69 TNGHLRGQSAPLSSAPFFPEVDGLLSLFKDACKELVDLRKQVDGRLNTLKKEVSTQDSKHRKTLT 133

  Fly    84 KLQERHQTAIDVFGQLDEKINSVAGKIMHLGEQLENVNTPRSRSVEAQKLLNFMSEFLAA-GPVI 147
            ::::......:.|.:||.:|:||......:|:.|::.:..|..:.:...|:.::.||..: |.::
plant   134 EIEKGVDGLFESFARLDGRISSVGQTAAKIGDHLQSADAQRETASQTIDLIKYLMEFNGSPGDLM 198

  Fly   148 -VNDIFADAARLSEAADVIQKLYAISQD-------------LPPGNFAE-SKRKIEKKYDEVERR 197
             ::.:|:|.:|::|||.:.|||.:.:::             ..||...| :...::...:|:|.|
plant   199 ELSALFSDDSRVAEAASIAQKLRSFAEEDIGRQGASAAAGNATPGRGLEVAVANLQDYCNELENR 263

  Fly   198 LIEEFATAQKSEDIERMKTLAQILSQFKGYTQCVDAYIEQSQM--------------------QP 242
            |:..|..|.:..|:..|...|:|||||...|..:..|:....|                    ||
plant   264 LLSRFDAASQRRDLSTMSECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNSDIRLVLGDHGSQP 328

  Fly   243 YSGKDIFIGIVPLCKHHYEIIQK-------VFANPQQVMSKFILNIYQLKLHQYAMTKLEDKKDE 300
             |..::..|:..|.|...:.::|       ||..|.:||:..:..:.:.:     :|.:.||...
plant   329 -SPSNVARGLSALFKEITDTVRKEAATITAVFPTPNEVMAILVQRVLEQR-----VTGILDKILA 387

  Fly   301 EK---------------YLRTLYELYSRTLKLSTDLQ-IYMSTIDDDLLQKLTQQIFIKHLAGYA 349
            :.               |||.|...|.||.:|:.||: :....:|   ::.||:.:|..|...|.
plant   388 KPSLMSPPPVQEGGLLLYLRMLAVAYERTQELAKDLRAVGCGDLD---VEDLTESLFSSHKDEYP 449

  Fly   350 EMETKCLTAKCSTELEKFYA-SKKHQKTATTKGFRRNMEVLIATRANINIAAIEDYGGETFLSEE 413
            |.|...|......::|:..| |::..:::.|.| |.....:.::...|::..:.|:         
plant   450 EHERASLKQLYQAKMEELRAESQQVSESSGTIG-RSKGASISSSLQQISVTVVTDF--------- 504

  Fly   414 LAINMLQEAKASLKRCRLLSNE-TELPGNAIKLNDILL--------------------------R 451
              :...:||   :.||.|.|:: ..|..|...:...||                          |
plant   505 --VRWNEEA---ITRCTLFSSQPATLAANVKAIFTCLLDQVSVYITEGLERARDSLSEAAALRER 564

  Fly   452 FLMHEHVDYALELGLQAVPLAEGRVFPQLYFFDVVQKTNIIVHLLDKLCHTSVIPCVSNTPKYSD 516
            |::...|..|.....:|...|....|..  |...||:....|.::.:....|:            
plant   565 FVLGRRVAAAAASAAEAAAAAGESSFKS--FMVAVQRCGSSVAIVQQYFANSI------------ 615

  Fly   517 YVFKKRILM----------EQIETKLD-------QGLDRSISAVIGWVKVYLQYEQKKTDYKPET 564
                .|:|:          |::.|.|.       :||.:.|..|:..|...|..|||.|||: .|
plant   616 ----SRLLLPVDGAHAASCEEMSTALSKAEAAAYKGLQQCIETVMAEVDRLLSSEQKSTDYR-ST 675

  Fly   565 DVDTISS-----AACLQVVQNLQPVIVQIKKCVDGENLQNVLTEFGTRLHRVIYDHLQTMQFNTA 624
            | |.|:|     .||::||..|..|:......::|.|.|..|||.|.||.:::..|.|...||.:
plant   676 D-DGIASDHRPTNACIRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLEKLLLTHWQKFTFNPS 739

  Fly   625 GAMCAICDVNEYRKCIRELDSPLVTQLFDILHALCNLLLVKPQNLQEVCTGDTLNYLDKSVVRQF 689
            |.:....|:|||...::...:|.|.:.|::|..:.|:.:|.|.:|..:..|......|   .::|
plant   740 GGLRLKRDLNEYVGFVKSFGAPSVDEKFELLGIIANVFIVAPDSLPTLFEGSPSIRKD---AQRF 801

  Fly   690 IQLRTDFRIIKNTNYLKGI 708
            ||||.|::..|....|..:
plant   802 IQLREDYKSAKLATKLSSL 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec10NP_651218.1 RILP-like 46..>103 CDD:304877 10/56 (18%)
Sec10 89..705 CDD:284746 169/724 (23%)
SEC10NP_001031871.1 Sec10 139..817 CDD:311377 169/724 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3745
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38195
Inparanoid 1 1.050 153 1.000 Inparanoid score I1694
OMA 1 1.010 - - QHG54308
OrthoDB 1 1.010 - - D225235at2759
OrthoFinder 1 1.000 - - FOG0004379
OrthoInspector 1 1.000 - - otm2752
orthoMCL 1 0.900 - - OOG6_102983
Panther 1 1.100 - - O PTHR12100
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.880

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