DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsc1 and tsc1

DIOPT Version :9

Sequence 1:NP_477415.1 Gene:Tsc1 / 42862 FlyBaseID:FBgn0026317 Length:1100 Species:Drosophila melanogaster
Sequence 2:XP_031746838.1 Gene:tsc1 / 100380126 XenbaseID:XB-GENE-987982 Length:1117 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsc1NP_477415.1 Hamartin 3..715 CDD:282270
KASH_CCD 736..915 CDD:291334
tsc1XP_031746838.1 Hamartin 7..707 CDD:398199
Smc <668..966 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 189 1.000 Domainoid score I3241
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 258 1.000 Inparanoid score I3059
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131264at2759
OrthoFinder 1 1.000 - - FOG0004719
OrthoInspector 1 1.000 - - oto103348
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4416
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.