DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsc1 and tsc1b

DIOPT Version :9

Sequence 1:NP_477415.1 Gene:Tsc1 / 42862 FlyBaseID:FBgn0026317 Length:1100 Species:Drosophila melanogaster
Sequence 2:NP_001269321.1 Gene:tsc1b / 100330617 ZFINID:ZDB-GENE-030131-3404 Length:1228 Species:Danio rerio


Alignment Length:1224 Identity:286/1224 - (23%)
Similarity:512/1224 - (41%) Gaps:309/1224 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGD----LESNMTLENEEAKRKLVELLSQNKEQWVVKFMLDYFFTTGSQRILEVLVKAQAPHDGY 67
            :||    ||::...:..|.|..:.|.|:.::...::..::|||..|.|.:.:.:|...:.|||.:
Zfish     8 VGDLLPLLETSDLRQLNEIKGLINEHLNTDRGSVLLNGLVDYFLETNSAQTVHILSSVREPHDKH 72

  Fly    68 IFDKLDDCLKQSQHRVQSLQVFCFIVRHHPTWLYKIEKHRLIKSVFKLMTHEKEIVPLMSALLCI 132
            :|||:::|:.::..|:.:|.:...:||..|:|::||..:.|:.|:.|.:..:.::|.|::.:|.:
Zfish    73 LFDKMNECMAKAPCRLPTLTLLGHVVRKQPSWIHKIAHYPLLLSLLKCLKTDTDVVVLITGVLVL 137

  Fly   133 ITLLPIIPNSVPNFLNDLFEVFGHLASWKLQNSNKLPDEKLVHLQLGLQMLFHRLYGMYPCSFIA 197
            |||||:||.:....|.:.|::||.||||.|:|...:|:..|:||...:..|||||||||||:|::
Zfish   138 ITLLPMIPQAGKQHLYEFFDIFGRLASWNLRNPGHVPEVYLIHLHASVYSLFHRLYGMYPCNFVS 202

  Fly   198 YLVEFIKRGNGGGIFQHTIKPLLNTVRVHPMLVTATPETEVNNTRWKEMEPHDVVMECANLSLPV 262
            ||............|:..:||:|..||:||.|||.|.:.|::.:|||..|.||:|:|||.:||..
Zfish   203 YLRSHYSMKENMDTFEEVVKPMLEHVRIHPELVTGTKDQELDPSRWKRFEIHDIVIECAKVSLDP 267

  Fly   263 LLPETSNEDGSYAYP---------------MTP--------GYSRMT---------------SNT 289
              .|.|.|:|..:.|               .:|        |.|..|               |:.
Zfish   268 --KEASCEEGYASMPEHFCAHLQQRPADCTASPYGDFHSSYGSSSSTHFSTPRQPVVPPLALSSI 330

  Fly   290 SNTDYSYQLREFQQSRNVYTRFDSFASGDDVGPIWSPHNE--IATTSSGIPLTPT-----TSFIL 347
            |.|...|:.....:.:|....|::.....|  .:|||.::  :||..|...::|.     ::..|
Zfish   331 SGTQPPYRSPTGTRRQNSSCEFNATYGVKD--SLWSPSSQCGMATPPSSRGMSPNPELSQSASHL 393

  Fly   348 PLQ----PAMNSQLMVGMTGSSPPEAAVE-----------ATPETT---PLKD------------ 382
            |.:    ||...    |...||.|.||..           :||.:|   |.||            
Zfish   394 PSRLYSTPAGGK----GTPSSSTPAAATPPPSLSDEYPPVSTPRSTASPPCKDGRPLDHIKPVLV 454

  Fly   383 ----MRDIKQPGRAVNSH----AVRAIFAVSQPSSPMRKDQQSQFSFPDVSREAEESSHSYLEVN 439
                :|:.::.|....:|    .......:::.|..|::.:|.:     :.:|.|:::.:. |:.
Zfish   455 RQEQLRESEKTGPETMNHRDGRGENMPMTLTELSVYMKEQEQLR-----IEKEREDAAITE-ELL 513

  Fly   440 RGTAYDRRL-------SQVIQDRHNVERSVNTPCPSSLPEINSDLSLVGGSVYPSVTQEVAAVCG 497
            :.|...|.|       |........:..:...|.|||:  :::.:|.      |..|        
Zfish   514 KLTEEKRDLAGLRGFDSPFFSTTETLTGAQQKPLPSSI--LHNTIST------PDKT-------- 562

  Fly   498 ECNETDRNLCSVG----------GLHMPTSRSMHQLAKKRRNRMASYSGN-----GSCADSRSSA 547
            |...:|:...|.|          .:.||.....|.|.    :|..|...:     |.|:   .|.
Zfish   563 EITPSDKGRVSRGPSQEQPWSFQPVFMPIEHPTHSLL----HRSPSAPDDEALKFGLCS---PSP 620

  Fly   548 AKKASWSTEAENPMRRTKSCSALSGMRQQHLEENDDEADCSSQR-QRGENGNTQKTGSRLQRSGR 611
            .|......||...|...::.|...|.:...:.:.     .:.:| |||::|          |.|.
Zfish   621 CKPPPMPYEALFDMALPRAASLFVGRKTSEIVQR-----VAMERFQRGDSG----------RQGE 670

  Fly   612 NLAISAPKDTARSCTHASTQTVEGLDSAPAQYENWLIELLLECKEQRIDYERNLLYPQDILDEYI 676
            :                  :.|||:.||..      :|:|          :|.:....|..|:.:
Zfish   671 D------------------EGVEGVASASP------LEVL----------DRLVQQGGDAHDKVL 701

  Fly   677 KHAIKANESFD--------------AEQGQLMCL--QLEYESYRRSIHAERNRRLMGRSRDKRSL 725
            |.....::|.|              ..:.||:.|  ||.||.|:|..||.|||||:.|..:..:|
Zfish   702 KRLPLPSKSADWTHFGGSAPLDELHTLRSQLLLLHNQLLYERYKREQHAVRNRRLLRRIINATAL 766

  Fly   726 EMERDRLREQLKNFDAKNKDLANKMDQAIRLANERQNIHQEELGEMRAKYQHELEEKKC------ 784
            |.:.:.:::||..             |::.:.:.|:::..|:     .:|:...::::.      
Zfish   767 EEQNNAMKDQLNL-------------QSVDILSLRESLQVEQ-----QRYRQLWDDRETVVTRLH 813

  Fly   785 -----LRQANDD-------LQTRLTSELARHKEMNYELESLRGQVFSLGTELQHTQQQADIGLQC 837
                 |:||.||       ||::|.....|..||..||:....:|...|..|.....:.......
Zfish   814 SQIRQLQQARDDYYTKNQELQSKLQECQKRIGEMEAELQKANNEVCHTGHLLNQLTAKLSSSESI 878

  Fly   838 KQELARLEAEFIIMGEVQVRCRDRLAEIDNFRARDEELQMLQESSNLELKDLRHSLDEKTSQLES 902
            :|:|:.|..:.:::||....|...|.:.....::  |:||||.|...|.:.|:.:|..::.:|::
Zfish   879 QQQLSFLNKQLLLLGEAHKLCVQELHQAGPDTSK--EVQMLQTSWGKETERLKQNLLLQSQKLDA 941

  Fly   903 MKHKISDLQAQLANSEKAMTEQKRLLSTVKDEYEEKFKSVNKKYDVQKKIIMQMEEKLMMMMQQP 967
            .:.::::|:.||:..|..:.|||:.|..||.:.:.:.::...:|..|:::.:.::.:|:.:.   
Zfish   942 AQQRVAELETQLSKKEHLIAEQKKFLEDVKAQAKGELQASESRYQAQRRVTLALQTELLQLY--- 1003

  Fly   968 QGTTGHNTCSPDTDRTDIASSIE-RNSPLSTSLASSESLSASLRSTELKNLHQLVDTPTIPDVLN 1031
                               |.:| .:|..:.|...:|.::....:||             |.|: 
Zfish  1004 -------------------SRLETEDSSAADSALQAEGVTEPCITTE-------------PSVI- 1035

  Fly  1032 SMAGGAQFEDEVRPPAVDLASSASTASAINIVPHALDLPSTSGGIGHTLTHPHP 1085
             :.|||                ..||:..:..||     .:..|.|.||:..||
Zfish  1036 -VVGGA----------------IKTATKEDGKPH-----QSPRGYGSTLSPGHP 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsc1NP_477415.1 Hamartin 3..715 CDD:282270 207/833 (25%)
KASH_CCD 736..915 CDD:291334 40/196 (20%)
tsc1bNP_001269321.1 Hamartin 8..751 CDD:282270 203/828 (25%)
Lebercilin 811..1007 CDD:292252 47/219 (21%)
SPEC 831..>990 CDD:295325 40/160 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586328
Domainoid 1 1.000 235 1.000 Domainoid score I2302
eggNOG 1 0.900 - - E1_2CAZQ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 316 1.000 Inparanoid score I2529
OMA 1 1.010 - - QHG47070
OrthoDB 1 1.010 - - D131264at2759
OrthoFinder 1 1.000 - - FOG0004719
OrthoInspector 1 1.000 - - otm24294
orthoMCL 1 0.900 - - OOG6_108503
Panther 1 1.100 - - LDO PTHR15154
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5359
SonicParanoid 1 1.000 - - X4416
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.890

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