DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatB and gta2

DIOPT Version :10

Sequence 1:NP_651217.2 Gene:GatB / 42861 FlyBaseID:FBgn0039153 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_593434.1 Gene:gta2 / 2543074 PomBaseID:SPAC343.13 Length:526 Species:Schizosaccharomyces pombe


Alignment Length:541 Identity:152/541 - (28%)
Similarity:267/541 - (49%) Gaps:72/541 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KWKSVVGLEVHAQIASASKLFSGSGTSFGAPLNSSVAYFDASIPGTLPVLNRKCVESGIKTSLAL 86
            :|.:.:|||:|.|:|:..||||.:..:..|..|:.|||||.|:||::|:||.:.::..:|.:|||
pombe     5 RWAASIGLEIHLQLATVKKLFSPAKVNPLAQPNTCVAYFDVSLPGSMPILNPEALKFAVKGALAL 69

  Fly    87 GCRVNEVSMFDRKHYFYADLPNGYQITQQRAALANDGKMTFPVITPGKKVYYKTAKLLQ-LQLEQ 150
            .|.|..|..||||||||.|||.||||||:...:..:|   |..::.|......|...:| :||||
pombe    70 NCEVANVCKFDRKHYFYPDLPAGYQITQKEIPIGRNG---FIPLSAGLDNVPDTQIPIQHIQLEQ 131

  Fly   151 DSGKSLHDDYLKRSLVDLNRAGLPLMELVFAPDLETGEEAASLVKELILILRRLQTCSCKMEEGA 215
            |:.||.......|.|:|.||||.||:|:|..|........::.:.:|..|:|........||.|.
pombe   132 DTAKSTSAKNPSRILLDYNRAGTPLLEIVTKPCFHDVNTVSAFLFKLQSIVRFAGISEALMENGG 196

  Fly   216 LRVDANISI---------------------------H--QEGDPLGVRTEVKNIGSVRSISQAIT 251
            :|.|.|:||                           |  |.|..| .|.|:||:.:||::..:|.
pombe   197 MRCDVNVSIAPVISSENLNELHFKNNGVISVEKSISHFPQLGTQL-ARVELKNLSNVRNVVNSIR 260

  Fly   252 YEINRQLETVANGGVI-TNETRNWDAENRRTVAMRDKEVLQDYRFMPEPNLPPLHVNLKPGSMST 315
            :|::||: ::||.||. .:|||.:|....:|..:|:|....||.|:||.::||:           
pombe   261 HEVDRQV-SLANMGVSWPSETRGFDDITGKTFPLRNKTTSDDYLFLPETDIPPI----------- 313

  Fly   316 EDLLS---VAALSEEIPELPEDTRQRLVE-QHNLNAETAIILV----------NEPILLDHFLSI 366
              :||   |.::.:.:|.||::..|:|.. .|.::.:.|..|:          |....:|....:
pombe   314 --ILSRSYVNSVLKSLPALPDELFQKLTTGSHAISHKEARTLLSVKEYYHYYRNAYHHIDSISHV 376

  Fly   367 TRSLSDLPNKVICNFLINDLLTYCNKL----NLDVEDCSIKADDLKDILMSLHAELINLQAARQL 427
            .:||.:...:.:..::..:|:....::    |:::    :....|.||::.:..:.:...:|:..
pombe   377 NQSLKEDALRTLPYWITVELVGKVREIDPSPNINI----VPPLQLADIVLLVSKKKLTAASAKLF 437

  Fly   428 VDLLHNNPKAK-VSELIELHSLQQICSPDEIENLCQLAIANQAKAVEQYQKGKAKALFAIAGEVA 491
            :..|..:|.:| :|.||:..:...|...::|:...:..::..:|..|:.:.||...:....|...
pombe   438 LRSLIKSPSSKPISTLIQEKNFGTIGDSEKIKACVESVLSKHSKQFEELKNGKTSLIKWFVGLTM 502

  Fly   492 KLSSQKANMKLVVQRLEKLLK 512
            :....:|:.|.:...::..|:
pombe   503 RELRGQASPKDIEMEVQSSLR 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatBNP_651217.2 GatB 22..512 CDD:439834 151/539 (28%)
gta2NP_593434.1 GatB 4..512 CDD:439834 150/528 (28%)

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