DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatB and Gatb

DIOPT Version :10

Sequence 1:NP_651217.2 Gene:GatB / 42861 FlyBaseID:FBgn0039153 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_006501392.1 Gene:Gatb / 229487 MGIID:2442496 Length:623 Species:Mus musculus


Alignment Length:532 Identity:226/532 - (42%)
Similarity:309/532 - (58%) Gaps:78/532 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VTAPKL--ANVPKR---KWKSVVGLEVHAQIASASKLFSGSGTSFGAPLNSSVAYFDASIPGTLP 69
            |..|.|  |..|::   ||.:|||||:||||:|.||||||:...|.||.||.|:|||||:|||||
Mouse    45 VAQPSLHTAQKPRKGEHKWAAVVGLEIHAQISSNSKLFSGAQVCFAAPPNSLVSYFDASLPGTLP 109

  Fly    70 ----------------------------------------------------------------- 69
                                                                             
Mouse   110 STSASSECMPPSHCMEEAASINRLSRGSNHVAVCHSSRGAPSGSVLKSQTWTLRWECCFSTAIPH 174

  Fly    70 VLNRKCVESGIKTSLALGCRVNEVSMFDRKHYFYADLPNGYQITQQRAALANDGKMTFPVITPGK 134
            ||||:|||:.:.|.|||.|.:|:.|:||||||||:|||.||||||||..:|.:|.:|: .|..||
Mouse   175 VLNRRCVEAAVMTGLALNCHINKKSLFDRKHYFYSDLPAGYQITQQRLPIAANGHLTY-CIYLGK 238

  Fly   135 K---VYYKTAKLLQLQLEQDSGKSLHDDYLKRSLVDLNRAGLPLMELVFAPDLETGEEAASLVKE 196
            |   |..||.::.|:|||||||||||||...::|:||||||:.|:|:|..|||..|||||..|:|
Mouse   239 KPSQVTTKTVRIKQIQLEQDSGKSLHDDLRSQTLIDLNRAGIGLLEVVLEPDLCCGEEAALAVRE 303

  Fly   197 LILILRRLQTCSCKMEEGALRVDANISIHQEGDPLGVRTEVKNIGSVRSISQAITYEINRQLETV 261
            |.|||:.|.|....|.||.||||||||:|..|:||||||||||:.|:|.:::||.|||.||:..:
Mouse   304 LQLILQALGTSQANMAEGQLRVDANISVHHPGEPLGVRTEVKNLNSLRFLAKAIDYEIQRQITEL 368

  Fly   262 ANGGVITNETRNWDAENRRTVAMRDKEVLQDYRFMPEPNLPPLHV---NLKPGSMSTEDLLSVAA 323
            .|||.|.||||::|.:...|:.|||||..||||||||||||||.:   ...|....::.::::..
Mouse   369 ENGGEILNETRSFDYKLGCTMPMRDKEGKQDYRFMPEPNLPPLVLYDDTSLPRGADSQQVINIDQ 433

  Fly   324 LSEEIPELPEDTRQRLVEQHNLNAETAIILVNEPILLDHFLSITRSLSDLPNKVICNFLINDLLT 388
            |.:.:||||..||:|||:|:.:..|.:..|:||..||:.|.::.:.....|.|| .|:::|..|.
Mouse   434 LRDMLPELPSATRERLVQQYGMLPEHSFALLNEVGLLEFFQNVIKETRTEPKKV-TNWVLNTFLC 497

  Fly   389 YCNKLNLDVEDCSIKADDLKDILMSLHAELINLQAARQLVDLLHNNPKAKVSELIELHSLQQICS 453
            |..:.||.|.:..:....|.::|..|..:.|:..||:|:.:.|........::::....|:.:..
Mouse   498 YLKQQNLAVSESPVTPSALAELLNLLDRKAISSSAAKQVFEELWKGEGKTAAQIVSEQQLELMQD 562

  Fly   454 PDEIENLCQLAI 465
            .:.:|.|||..|
Mouse   563 QEALEKLCQTTI 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatBNP_651217.2 GatB 22..512 CDD:439834 221/515 (43%)
GatbXP_006501392.1 GatB 62..580 CDD:439834 221/515 (43%)

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