DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatB and gatb

DIOPT Version :10

Sequence 1:NP_651217.2 Gene:GatB / 42861 FlyBaseID:FBgn0039153 Length:516 Species:Drosophila melanogaster
Sequence 2:XP_002933542.2 Gene:gatb / 100486675 XenbaseID:XB-GENE-983472 Length:515 Species:Xenopus tropicalis


Alignment Length:511 Identity:230/511 - (45%)
Similarity:330/511 - (64%) Gaps:16/511 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KLANVPKR----------KWKSVVGLEVHAQIASASKLFSGSGTSFGAPLNSSVAYFDASIPGTL 68
            |:.|:|::          :|..|||||:||||.|.|||||.|...|.||.||:|::||||:||||
 Frog     2 KIGNLPQKAGLLGAMRVVRWVGVVGLEIHAQINSESKLFSSSRVQFAAPPNSTVSFFDASLPGTL 66

  Fly    69 PVLNRKCVESGIKTSLALGCRVNEVSMFDRKHYFYADLPNGYQITQQRAALANDGKMTF--PVIT 131
            ||:||:|:|:.:.|.|||.|.:|:.|:||||||||||||.||||||||..:|.:|.:|:  .|..
 Frog    67 PVINRRCIEAAVMTGLALNCSINKKSLFDRKHYFYADLPAGYQITQQRLPVAVNGTLTYRHQVGA 131

  Fly   132 PGKKVYYKTAKLLQLQLEQDSGKSLHDDYLKRSLVDLNRAGLPLMELVFAPDLETGEEAASLVKE 196
            ...::..|..::.|:||||||||||||:..:::||||||||:.|||:|..||:..|||||:.|:|
 Frog   132 KWNQMLTKCVRIKQVQLEQDSGKSLHDEIRRQTLVDLNRAGVGLMEIVMEPDMSCGEEAAAAVRE 196

  Fly   197 LILILRRLQTCSCKMEEGALRVDANISIHQEGDPLGVRTEVKNIGSVRSISQAITYEINRQLETV 261
            |.|||:.|.||:..|.||.:|||||||:|:.|:|.|||||||||.|.|.:::||.|||.||::.:
 Frog   197 LQLILQALGTCNANMSEGQMRVDANISVHRPGEPYGVRTEVKNINSARFLAKAIDYEIQRQVDVL 261

  Fly   262 ANGGVITNETRNWDAENRRTVAMRDKEVLQDYRFMPEPNLPPLHV---NLKPGSMSTEDLLSVAA 323
            .|||...||||.:|.:...|:.|||||..||||||||||||||.:   |..|.:...:.::::..
 Frog   262 ENGGTNLNETRAFDYKLGATIPMRDKEGKQDYRFMPEPNLPPLVLYDSNSLPANADPDQIINIDL 326

  Fly   324 LSEEIPELPEDTRQRLVEQHNLNAETAIILVNEPILLDHFLSITRSLSDLPNKVICNFLINDLLT 388
            :.:..||||...|:|||||:.:..|.:.|||||..|.::|.::.|..:..|.|:| .:||||||.
 Frog   327 IRKNQPELPSVIRERLVEQYGILPEQSFILVNEEGLQEYFQTVVRMTNVDPKKII-GWLINDLLG 390

  Fly   389 YCNKLNLDVEDCSIKADDLKDILMSLHAELINLQAARQLVDLLHNNPKAKVSELIELHSLQQICS 453
            :..:.||.::...:....|.::|..|....|:..||:|:...|....:...:|:|:..:|..:..
 Frog   391 HLRQQNLTIKQSPVSPVALAELLTLLDNGSISSSAAKQVFQELCKGGEKTPAEIIKEKNLGLLKD 455

  Fly   454 PDEIENLCQLAIANQAKAVEQYQKGKAKALFAIAGEVAKLSSQKANMKLVVQRLEK 509
            ..::|.:||..:....|.|.:.::|..|.:..:.|.|.|.:..:|:..||...||:
 Frog   456 RMQLEEICQRILNGHQKEVAEIRQGNHKIMNKLIGLVQKATKGRADPVLVKSILEE 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatBNP_651217.2 GatB 22..512 CDD:439834 227/493 (46%)
gatbXP_002933542.2 GatB 27..512 CDD:439834 223/486 (46%)

Return to query results.
Submit another query.