Sequence 1: | NP_001287497.1 | Gene: | Root / 42860 | FlyBaseID: | FBgn0039152 | Length: | 2048 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017448904.1 | Gene: | Crocc / 313663 | RGDID: | 1305364 | Length: | 2015 | Species: | Rattus norvegicus |
Alignment Length: | 2003 | Identity: | 558/2003 - (27%) |
---|---|---|---|
Similarity: | 987/2003 - (49%) | Gaps: | 251/2003 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 DPSALLRQNQELRQRLADESHSYRRRLDTYKQAQHNQANLVSRLQSKIQQYRQRCSDLEERMHET 151
Fly 152 IKPTAGVGPKLTTGPTNQVLCSTSLTLGQSSLPCSSSLDSPPPSCSRDYVDDVLVTGGGAGAAEL 216
Fly 217 CRKLEEEHQRCEQIVAQNSALRQQLEESNRTNEALTNDLQKLTNDWASLRDELLIKEDEFKEEEQ 281
Fly 282 AFKDYYNSEHNRLLKMWREVVAVKRSFKEMQTAMKAEVAKMGQEINCVGKDINGSNATVAFAVQQ 346
Fly 347 AKRAADDELKQSQRSNDELQNQ----------LATLKVQYE------SAR------------HEI 383
Fly 384 MERDQRLLELMNQLKKLEDRCAQAESQAALASRYSDEIERLNNSMREIAQAVVQDAE------NA 442
Fly 443 DREADAEVTGGVMQHMHLTRDAASVVGGAGGAGST-----AGGGGKSPRRNSTRASQAFAEGTIS 502
Fly 503 AVQAALHKYQLALHDMQVKFQNTSETLRTTKAQLETSEGTKQLLTTKMQQL-------------- 553
Fly 554 ---TEKLDSSNSKLSELLQERESLQRGLDDIRVQKQQSEMGRADINSAFENLSSDYEKMQLNCGK 615
Fly 616 LQKRIDSMEEDKKAVELEIQRILKDKNITELNLRSEEDRSSRLREETISLREELNRVSLNRDLLE 680
Fly 681 QQRIESDNLINLLEKQKSDLEYDLDKLLLEKCDLQEKHEKLSNNSCSTSDELKSVQNCLQEAQEE 745
Fly 746 RKKL--RIQSVDQCNEIGELKKELAILDKARLELETDNLSAGEKLKCLQLEKEKILQDLACVTRD 808
Fly 809 RGDIHNQLTAMCRKKEALNEELMRTRQRLEQTTETNSRLNRNLEEMVKDVEEKQVVIDLHEKDTH 873
Fly 874 RLNELLAALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEALVREESLKNHVARLQKELEQC 938
Fly 939 QRKA---QETKTQ-LLNAARAAESDFNQKIA----NLQAC--AEEAAKRHGEEILQLRNALEKRM 993
Fly 994 QQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQQALLIAHRDKQAVAERL 1058
Fly 1059 EAVSRDLKTEQESLDRSRREANARDEKQRAAIAQLKDEMVQMRTKEEEHKIKLEECIRKQELQLS 1123
Fly 1124 SLREERESLCRVSEELKMEIRLKEDRMESTNNELQDALRKSKEGEGFIDSLRKELTDCRRQLADS 1188
Fly 1189 NIERDKYSGSNKELRDHVKRVESAKREQARAIEEALQKISNLEDTKNSLENERTRLSTILKETEN 1253
Fly 1254 HFTKTTQDLNATKAQLQKAQVEFAQKDEG--GKE---LQCKLVAEVELKERAQQELCQIKKQLSD 1313
Fly 1314 LEANLCATRQELGRARCQNNQEEHRFHAREQELAQRLEEGRGREKRLEDQKHNLEVCLADATQQI 1378
Fly 1379 QELKARLGGAEGRIRALDEQLSCVELHKRDTEQKLSSVVHTLRRIAGIQVDGSVNLSHRLLSPSR 1443
Fly 1444 RFSPSRSCGD---------YDNRSTSQCPDGPI------DVDPDLVRKGVRNLMHQVAQLEREKD 1493
Fly 1494 DYKSQLGAAKKQLQDAADQQLRCDAKLGKLQAMLRNLQEEKSNLETDRKMKISAIQA----LEEK 1554
Fly 1555 LKHRNDECQMLRERLAQTEMQLAATSEENGQNEERLEKSRQQCSKLDNEKRQLQEELAKVEGRAS 1619
Fly 1620 KLELQRVAMEGDLTRLQMALQEKDCSIRQMAERLENQNRALTQLEDRCTALKSTVDQLKERLQKS 1684
Fly 1685 AVSETQLRGEIKTLQKELSEQGHCSQANEDKLKLVQKSLQTAENEKRILTERLDSAQTNLNELRR 1749
Fly 1750 SQQAQLDGNQRLQEQVTDLEVQRSALESQL----RIAKWNQESGGDKDLTNGNGGGNGEEELSRQ 1810
Fly 1811 LKSSQREKSELRSKLQTLQDKVKQLECDR-----------KSKFSGGNAYDRAEKSNSFYGGAAE 1864
Fly 1865 SGEFDSNRYDVGGGNAGGGSFNCGLDHSVIEQETRDLRLKVRRLETLLAEKESELARCKARMNDS 1929
Fly 1930 AKCHDGLDGDRYRSAQMHAEKLLDAREQSHRQQVLRLENQIS--MLREQLAQE 1980 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Root | NP_001287497.1 | Rootletin | 110..332 | CDD:291694 | 67/221 (30%) |
Smc | 555..1384 | CDD:224117 | 236/845 (28%) | ||
SMC_prok_B | 991..>1779 | CDD:274008 | 243/811 (30%) | ||
Crocc | XP_017448904.1 | CCDC158 | <55..>660 | CDD:318193 | 164/606 (27%) |
Rootletin | 158..335 | CDD:405685 | 67/220 (30%) | ||
Smc | 617..1366 | CDD:224117 | 211/776 (27%) | ||
Smc | 1093..1882 | CDD:224117 | 235/822 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 542 | 1.000 | Domainoid score | I253 |
eggNOG | 1 | 0.900 | - | - | E1_2CMIF | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H16811 | |
Inparanoid | 1 | 1.050 | 659 | 1.000 | Inparanoid score | I735 |
OMA | 1 | 1.010 | - | - | QHG46615 | |
OrthoDB | 1 | 1.010 | - | - | D48753at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001653 | |
OrthoInspector | 1 | 1.000 | - | - | oto96446 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106109 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23159 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3005 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.840 |