Sequence 1: | NP_001287497.1 | Gene: | Root / 42860 | FlyBaseID: | FBgn0039152 | Length: | 2048 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001371014.1 | Gene: | lfi-1 / 180771 | WormBaseID: | WBGene00022500 | Length: | 2401 | Species: | Caenorhabditis elegans |
Alignment Length: | 2414 | Identity: | 471/2414 - (19%) |
---|---|---|---|
Similarity: | 922/2414 - (38%) | Gaps: | 568/2414 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 QSATASRLPFSRSQRGRDPSASGASVSASVAGGLTPRMMSPGPPGAGG-----------GGGGGV 80
Fly 81 SGGGSGDPSALLRQNQE------LRQRLADESHSYRRRLDTYKQAQHNQANLVSRLQSKIQQYRQ 139
Fly 140 RCSDLEERMHETIKPTAGVGPKLTTGPTNQVLCSTSLTLGQSSLPCSS-SLDSPPPSCSRDYVDD 203
Fly 204 VLVTGG----------------GAGAA-----------------ELCRKLEEEHQRCEQIVAQNS 235
Fly 236 ALRQQLEESNRTNEALTNDLQKLTNDWASLRDELLIKEDEFKEEEQAFKDYYNSEHNRLLKMWRE 300
Fly 301 VVAVKRSFKEMQTAMKAEVAKMGQEINCVGKDINGSNATVAFAVQQAKRAADDELKQSQRSNDEL 365
Fly 366 QNQLATLKVQYESARHEIMER--------DQRLLELMNQLKKLE---DRCAQAESQAALASRYSD 419
Fly 420 EIERL-------NNSMREIAQAVVQDAENADREADAEVTGGVMQHMH-LTRDAASVVGGAGGAGS 476
Fly 477 TAG-GGGKSPRRNSTRASQAFAEGTISAVQAALHKYQLALHDMQVKFQNTSETLRTTKAQLETSE 540
Fly 541 GTKQLLTTKMQQLTEKLDSSNSKLSELLQERESLQRGLDDIRVQKQQ-------SEMGRADINSA 598
Fly 599 FENLSSDYEKMQLNCGK-----LQKRIDSMEEDKKAVELEIQRILKDKNITELNLRSEE--DRSS 656
Fly 657 RLREETISLREELNRVSLNRDL-----LEQQRI-ESDNLINLLEKQKSDLEYDLDKLLLEKCDLQ 715
Fly 716 EKHEKLSNNSCSTSDELKSVQNCLQEAQEERKKLRIQSVD-------QCNEIGELKKELAILDKA 773
Fly 774 RLELETDNLSAGEKLKCLQLEKEKILQDLACVTRDRGDIHNQLTAMCRKKEALNEELMRTRQRLE 838
Fly 839 Q-TTETNSR---------LNRNLEEMVKDVEEKQVVIDLHEKDTHRLNELLAALRSEKESLES-- 891
Fly 892 --------------------------VLFDTNTSLEATEERRSQLERDLQEALVREESLKNHVAR 930
Fly 931 LQK----------------------ELEQCQRKAQETKTQLLNAARAAES--------------- 958
Fly 959 ---------DFNQK----IANLQACAEEAAKR-----HGEEILQLR-NALEKRMQQALQALQTAK 1004
Fly 1005 DD---EIEKLQERLATL-------QAHLESLVQQHEEALIRAESEKQQALLIAHRDKQ------- 1052
Fly 1053 -----AVAERLEAVSRDLKTEQESLDRS-----------RREANARDEKQRAAIAQ---LKDEMV 1098
Fly 1099 QMRTKEEEHKIKLEECIRKQELQLSSLREERESLCRVSEELKMEIRLKEDRMESTNNELQDALRK 1163
Fly 1164 SKEGEGFIDSLRKELTDCRRQLADSNIERDKYSGSNKELRDHVKRVESAKREQARAIEEALQKIS 1228
Fly 1229 NLEDTKNSLENERTRLSTILKETENHFTKTTQDLNATKAQLQKAQVEFAQKDEGGKELQCKLVAE 1293
Fly 1294 VELK-ERAQQELCQIKKQL--SDLEANLCATRQELGRARCQNNQEEHRFHAREQELAQRLEEGRG 1355
Fly 1356 REKR--------LEDQKHNLEVCLADATQQIQELKAR---LGGAEGRIRALDEQLSCVELH--KR 1407
Fly 1408 DTEQKLSSVVHTLRRI-------------------------AGIQVDGSVNLSHRL--------- 1438
Fly 1439 --------------------------------------LSPSRRFSPSR----SCG-----DYDN 1456
Fly 1457 RSTSQCPDGPIDVDPDLVRKGVRNLMHQVAQLEREKDDYKSQLGAAKKQLQDAADQQLRCDAKLG 1521
Fly 1522 KLQAMLRNLQEEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQTEMQLAATSEENGQN 1586
Fly 1587 EERLEKSRQQCSKLDNEKRQLQEELAKVEGRASKLELQRVAMEGDLTRLQMALQEKDCSIRQMAE 1651
Fly 1652 RLENQNRALTQLEDRCTALKSTVDQLKERLQKSAVSETQLRGEIKTLQKELSEQGHCSQANEDKL 1716
Fly 1717 KLVQKSLQTAENEKRILTERLDSAQTNLNELRRSQQAQLDGNQR---LQEQVTDLEVQRSALESQ 1778
Fly 1779 -LRIAKWNQESGGDKDLTNGNGGGNGEEELSRQLKSSQREKSELRSKLQTLQDKVKQLECDRK-- 1840
Fly 1841 SKFSGG-------------------NAYDRAEKSNSFYGGAAESGEFDSNRYDVGGGNAGGGSFN 1886
Fly 1887 CGLDHSVIEQETRDLRLKVRRLETLLAEKESELARCKARMNDSAKCHDGLDGDRYRSAQMHAEKL 1951
Fly 1952 LDAREQSHRQQVLRLENQISMLREQLAQEAKRRQQYILRS-----SKANREMQHLRSTLGDS--- 2008
Fly 2009 ------LRNVSQHPVD-------------------PHLLESESRRLDSAVSMSLPPSSCRD---- 2044
Fly 2045 -----YDRD 2048 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Root | NP_001287497.1 | Rootletin | 110..332 | CDD:291694 | 55/255 (22%) |
Smc | 555..1384 | CDD:224117 | 195/996 (20%) | ||
SMC_prok_B | 991..>1779 | CDD:274008 | 184/924 (20%) | ||
lfi-1 | NP_001371014.1 | Rootletin | 200..438 | CDD:405685 | 55/255 (22%) |
COG4372 | 492..>715 | CDD:226809 | 45/248 (18%) | ||
Smc | 660..1505 | CDD:224117 | 173/899 (19%) | ||
SMC_prok_B | 1244..2142 | CDD:274008 | 191/973 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160167828 | |
Domainoid | 1 | 1.000 | 59 | 1.000 | Domainoid score | I7137 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 228 | 1.000 | Inparanoid score | I2211 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46615 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001653 | |
OrthoInspector | 1 | 1.000 | - | - | oto18347 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106109 | |
Panther | 1 | 1.100 | - | - | O | PTHR23159 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5360 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.020 |