Sequence 1: | NP_001287497.1 | Gene: | Root / 42860 | FlyBaseID: | FBgn0039152 | Length: | 2048 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001073904.1 | Gene: | WHAMM / 123720 | HGNCID: | 30493 | Length: | 809 | Species: | Homo sapiens |
Alignment Length: | 448 | Identity: | 101/448 - (22%) |
---|---|---|---|
Similarity: | 169/448 - (37%) | Gaps: | 94/448 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 818 AMCRKKEALNEELMRTR-----QRLEQTTETNSRLNRNLEEMVKDVEEKQVVIDLHEKDTHRLNE 877
Fly 878 LLAALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEALVREESLKNHVARLQKELEQCQRKA 942
Fly 943 QETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGE----------EILQLRNALEKRMQQAL 997
Fly 998 QALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQ--QALLIAHRDKQAVAERLEA 1060
Fly 1061 VSRDLKTEQESLDRSRREANARDEKQRAAIAQLKDEMVQMRTKEEEHKIKLEECI----RKQELQ 1121
Fly 1122 LSSLREERESLCRVSEELKMEIRLKEDRMESTNNELQDALRKSKEGEGFIDSLRKELTDCRRQLA 1186
Fly 1187 DSNIERDKYSGSNKELRDHVKRVESAKRE---QARAIEEALQKISNLEDTK--NSLEN 1239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Root | NP_001287497.1 | Rootletin | 110..332 | CDD:291694 | |
Smc | 555..1384 | CDD:224117 | 101/448 (23%) | ||
SMC_prok_B | 991..>1779 | CDD:274008 | 56/260 (22%) | ||
WHAMM | NP_001073904.1 | Mediates association with membranes. /evidence=ECO:0000269|PubMed:18614018 | 1..260 | 18/82 (22%) | |
WHAMM-JMY_N | 5..53 | CDD:292542 | |||
JMY | 78..442 | CDD:292496 | 70/308 (23%) | ||
Mediates interaction with microtubules. /evidence=ECO:0000269|PubMed:23027905 | 261..630 | 82/364 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 506..529 | 6/22 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 546..571 | 3/11 (27%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 586..612 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 627..707 | ||||
Mediates actin nucleation. /evidence=ECO:0000269|PubMed:18614018 | 631..809 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 754..809 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |