DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MITF and Mitf

DIOPT Version :10

Sequence 1:NP_001341533.1 Gene:MITF / 4286 HGNCID:7105 Length:526 Species:Homo sapiens
Sequence 2:NP_001178018.1 Gene:Mitf / 25094 RGDID:3092 Length:526 Species:Rattus norvegicus


Alignment Length:526 Identity:495/526 - (94%)
Similarity:506/526 - (96%) Gaps:0/526 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLRQQLMR 65
            ||||||||.|||||||||||||||||||||||||||||||.||||||:|||:|||||||||||||
  Rat     1 MQSESGIVADFEVGEEFHEEPKTYYELKSQPLKSSSSAEHSGASKPPLSSSTMTSRILLRQQLMR 65

Human    66 EQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYH 130
            |||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
  Rat    66 EQMQEQERREQQQKLQAAQFMQQRVAVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYH 130

Human   131 IQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEG 195
            ||||||.|||||||||||||||.||||.|||||||||.||||||||||||||||||||||||||.
  Rat   131 IQQAQRHQVKQYLSTTLANKHAGQVLSPPCPNQPGDHAMPPVPGSSAPNSPMAMLTLNSNCEKEA 195

Human   196 FYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGN 260
            |||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 FYKFEEQSRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGN 260

Human   261 LIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRF 325
            |||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 LIDLYSNQGLPPPGLTISNSCPANLPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRF 325

Human   326 NINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLL 390
            |||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||
  Rat   326 NINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLENRQKKLEHANRHLLL 390

Human   391 RIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTI 455
            |:|||||||||||||||||||||||||||||||||||||||||:|:||.||||||||||||||||
  Rat   391 RVQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQELVQHQADLTCTTTLDLTDGTI 455

Human   456 TFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSME 520
            :|.|||||..|::.|||:|.||.|.||||||||.|||||||||||||||||||||||||||||.|
  Rat   456 SFTNNLGTMPESSPAYSIPRKMASNLEDILMDDALSPVGVTDPLLSSVSPGASKTSSRRSSMSAE 520

Human   521 ETEHTC 526
            ||||.|
  Rat   521 ETEHAC 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MITFNP_001341533.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 48/52 (92%)
MITF_TFEB_C_3_N 56..194 CDD:464952 132/137 (96%)
Transactivation 224..295 69/70 (99%)
bHLHzip_MITF 300..403 CDD:381496 100/102 (98%)
Leucine-zipper. /evidence=ECO:0000305|PubMed:24631970 374..395 19/20 (95%)
DUF3371 397..516 CDD:463372 103/118 (87%)
DNA-binding regulation 401..431 29/29 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526 28/29 (97%)
MitfNP_001178018.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..54 30/33 (91%)
MITF_TFEB_C_3_N 56..194 CDD:464952 132/137 (96%)
bHLHzip_MITF 300..403 CDD:381496 100/102 (98%)
Leucine-zipper. /evidence=ECO:0000305 374..395 19/20 (95%)
DUF3371 397..522 CDD:463372 108/124 (87%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526 28/29 (97%)

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