DRSC/TRiP Functional Genomics Resources

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Protein Alignment MITF and hlh-30

DIOPT Version :10

Sequence 1:NP_001341533.1 Gene:MITF / 4286 HGNCID:7105 Length:526 Species:Homo sapiens
Sequence 2:NP_001023411.1 Gene:hlh-30 / 177157 WormBaseID:WBGene00020930 Length:524 Species:Caenorhabditis elegans


Alignment Length:570 Identity:146/570 - (25%)
Similarity:226/570 - (39%) Gaps:187/570 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    40 HPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQAAQF-------MQQR------VP 91
            :|.|.:||.:          :||...:|.|:|...::..:..|:||       |:||      :|
 Worm    18 NPRAQQPPGA----------QQQQQPQQAQQQFYDDEPYQANASQFRFGAGKSMEQRRETGNLIP 72

Human    92 VSQTPAINVSVPTTLPSATQVPMEVLKVQTH---------LENPTKYHIQQAQRQQVKQYLSTTL 147
            ::|...          .:|..|......|::         |.:|.|       .||..|.|...:
 Worm    73 IAQRSM----------GSTSTPFGSAPTQSYFGGGSSGAALSSPRK-------MQQTHQMLFGNI 120

Human   148 ANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAESECPG- 211
                           || ....||..||                  :..::|     .||..|| 
 Worm   121 ---------------QP-PRGSPPSDGS------------------DKIHRF-----GESPTPGG 146

Human   212 ----MNTHSRASCMQMDD-VIDDIISLESSYNEEILGLMDP------------ALQMANTLPVSG 259
                ..|       ::|| :||:::.:|....      |.|            .:.||..:|.:.
 Worm   147 VGGVFGT-------ELDDLIIDELMGMEDDQR------MRPGATRPMTIGGEKTMSMARPIPGAS 198

Human   260 NLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIFPTES---------------------EA 303
            :... .|:.|.|   :||.|:...|.    |::.:...||.|                     :.
 Worm   199 SRAG-SGHSGSP---ITIPNAMSNNF----RQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDP 255

Human   304 RALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQ 368
            ....::|:|||.||:||||||:||||||||||.::||:...||:.|||||||||.||||.||:::
 Worm   256 EDYYRDRRKKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDR 320

Human   369 QRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQE----PVLE 429
            ::|.:.:.:||.||........|::|||......|:.:.||.....|.::.|.||||    |...
 Worm   321 EQAMKTQQQQKSLESTAHKYADRVKELEEMLARQGVQVPPSHLPPIPKVIERPIKQEIDESPPNH 385

Human   430 NCSQDLLQHHADLTCTTTLDLTDGTITF----------NNNLGTGTEANQAYSV--------PTK 476
            ..:...:.....|:     ::|:.|...          ||.:.....::..:||        .|.
 Worm   386 TPTGSFVSSSGFLS-----EVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYRTS 445

Human   477 MGS---KL------EDILMDDTLSPVGVTDPLLSSVS--PGASKTSSRRS 515
            .|:   ||      .|::||| |:|:...|||:||..  |.....||:.|
 Worm   446 SGTASWKLPGSNAFSDLMMDD-LNPMMNGDPLISSAGAHPSPHFHSSQMS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MITFNP_001341533.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 4/13 (31%)
MITF_TFEB_C_3_N 56..194 CDD:464952 29/159 (18%)
Transactivation 224..295 18/83 (22%)
bHLHzip_MITF 300..403 CDD:381496 51/123 (41%)
Leucine-zipper. /evidence=ECO:0000305|PubMed:24631970 374..395 5/20 (25%)
DUF3371 397..516 CDD:463372 36/152 (24%)
DNA-binding regulation 401..431 10/33 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526 9/22 (41%)
hlh-30NP_001023411.1 bHLHzip_MITF_like 260..328 CDD:381403 42/67 (63%)

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