DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MITF and mitfb

DIOPT Version :10

Sequence 1:NP_001341533.1 Gene:MITF / 4286 HGNCID:7105 Length:526 Species:Homo sapiens
Sequence 2:NP_571922.2 Gene:mitfb / 114833 ZFINID:ZDB-GENE-010919-1 Length:500 Species:Danio rerio


Alignment Length:560 Identity:335/560 - (59%)
Similarity:402/560 - (71%) Gaps:94/560 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHP-GASKPPISSSSMTSRILLRQQLM 64
            ||||||||||||||::||||||||||||||||::|:.:|.. |:.|||:.|    ||:|||||||
Zfish     1 MQSESGIVPDFEVGDDFHEEPKTYYELKSQPLQNSNPSEQQHGSCKPPLGS----SRVLLRQQLM 61

Human    65 REQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKY 129
            |||:|:|||||||::         ::.::.:||||||.|...|||.|||||||||||||||||||
Zfish    62 REQLQQQERREQQKR---------QISITHSPAINVSHPCGPPSAAQVPMEVLKVQTHLENPTKY 117

Human   130 HIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDH-VMPPVPGSSAPNSPMAMLTLNSNCEK 193
            |||||||||||.||||||..|   |.:|||||:|..|| .|||.||:||||||||:||||.||||
Zfish   118 HIQQAQRQQVKAYLSTTLGGK---QAVSLPCPSQASDHGGMPPGPGNSAPNSPMALLTLNPNCEK 179

Human   194 EGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGL-MDPALQMANTLPV 257
            |                            |||||||||.|||||:::|:|| :||.||||||:||
Zfish   180 E----------------------------MDDVIDDIIGLESSYSDDIMGLSLDPGLQMANTIPV 216

Human   258 SGNLIDLYGNQGLPPPGLTISNSCPANLPNIKREL---------------TACI----------F 297
            |.||:|:|.|.||||||::||||||||:.::|||.               ::|.          |
Zfish   217 SANLLDMYSNPGLPPPGISISNSCPANMTSVKREFSVTPSPALMHMMDKPSSCSKFESYQRPEGF 281

Human   298 PTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIR 362
            |.|.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   282 PVEVEVRALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIR 346

Human   363 KLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPV 427
            ||||||.|.||||||||||||.||:|||||||||:|||||||:: .|:.||:.:|..|.|||||:
Zfish   347 KLQREQHRTKELENRQKKLEHTNRNLLLRIQELEIQARAHGLAM-ASSALCASELAARAIKQEPL 410

Human   428 LENCSQDL---LQHH---ADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILM 486
            |.:||||:   ...|   ||::.::||||.:|||:|::...:.|.|           :||:||||
Zfish   411 LGDCSQDMYTSTHAHPSCADMSRSSTLDLNNGTISFSDTHLSDTHA-----------AKLDDILM 464

Human   487 DDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC 526
            |:||:.....:.|:|:    ||..|:.:.||:|||.:|.|
Zfish   465 DETLTSGATNESLISA----ASNESTHKDSMNMEENQHAC 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MITFNP_001341533.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 37/53 (70%)
MITF_TFEB_C_3_N 56..194 CDD:464952 95/138 (69%)
Transactivation 224..295 49/86 (57%)
bHLHzip_MITF 300..403 CDD:381496 95/102 (93%)
Leucine-zipper. /evidence=ECO:0000305|PubMed:24631970 374..395 18/20 (90%)
DUF3371 397..516 CDD:463372 49/124 (40%)
DNA-binding regulation 401..431 15/29 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526 11/29 (38%)
mitfbNP_571922.2 MITF_TFEB_C_3_N 53..186 CDD:464952 101/172 (59%)
bHLHzip_MITF 284..387 CDD:381496 95/102 (93%)
DUF3371 381..496 CDD:463372 53/130 (41%)

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