Protein Alignment CG13605 and SAN1

DIOPT Version :10

• Sequence 1: NP_651214.2
• Gene: CG13605 / 42858
• FlyBaseID: FBgn0039150
• Length: 669
• Species: Drosophila melanogaster
• Sequence 2: NP_010427.3
• Gene: SAN1 / 851721
• SGDID: S000002550
• Length: 610
• Species: Saccharomyces cerevisiae
• Alignment Length: 159
• Identity: 30/159 - (18%)
• Similarity: 46/159 - (28%)
• Gaps: 89/159 - (55%)

  Fly   584 AIVTFRKNIDSERPPTKDELD------------AAGALCPICHDAF------------------- 617
            |:..|.:.::..:..:|||.|            |.|.||.||:|.:
Yeast   127 AMERFNRLLNRPKGISKDEFDKLPVLQVSDLPKAEGPLCSICYDEYEDEVDSTKAKRKRDSENEE 191

  Fly   618 ----------------------------------------------------------NTPTVLE 624
                                                                      ::|..|.
Yeast   192 ESEGTKKRKDNEGAPLRTTADNDSNPSITNATVVEPPSIPLTEQQRTLNDEETNPSYKHSPIKLP 256

  Fly   625 CGHIFCDECVQTWFKREQTCPMCRAKVSD 653
            |||||..||:..|.:.|.:||:||.|:|:
Yeast   257 CGHIFGRECIYKWSRLENSCPLCRQKISE 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG13605	NP_651214.2	HRD1	<571..>664	CDD:227568	30/159 (19%)
		RING-HC_RNFT1-like	608..648	CDD:438194	18/116 (16%)
SAN1	NP_010427.3	HRD1	<242..424	CDD:227568	17/44 (39%)
		RING_Ubox	<250..286	CDD:473075	17/36 (47%)