DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13605 and rnf145

DIOPT Version :9

Sequence 1:NP_651214.2 Gene:CG13605 / 42858 FlyBaseID:FBgn0039150 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001072260.1 Gene:rnf145 / 779713 XenbaseID:XB-GENE-979193 Length:695 Species:Xenopus tropicalis


Alignment Length:372 Identity:75/372 - (20%)
Similarity:135/372 - (36%) Gaps:118/372 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 LPLIFILFFKFLHDHLLGIVDLLVLQTVMYN-------VNRSVRNQVARLAQKNYAVMVRDTFLV 411
            |.|:|.:.|.     .||::.|.......|.       :||.:...|..|      ::...|.|:
 Frog   278 LGLVFTVSFV-----ALGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLL------ILAVQTGLI 331

  Fly   412 AVVVTVRLFLATSPPDPFGLIVPPSRKSVFIEVTALPFHTSSEGDSPTTSSEPI----KTNMYKD 472
            .:.|..|.||.:        |:      :||.|.::.       .|....::||    ..:..|.
 Frog   332 ELQVVHRAFLLS--------II------LFIVVASIL-------QSMLEIADPIVLALGASRDKS 375

  Fly   473 TYKSLNVIPLGMLLY----YIAVSDLIIKLLTMLVKLIITMLPHHLMRLKVRARLYV-------- 525
            .:|....:.|.:.|.    |:|.  :|.:...|...|:|.:....|..|:|...|::        
 Frog   376 LWKHFRAVSLCLFLLVFPSYMAY--MICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMIEE 438

  Fly   526 -----------LVEYISQFYRAM---------------TPITQW------LLFLYESYSGLEVVS 558
                       ::.|::..||.:               |...:|      ::|::..|:      
 Frog   439 FRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAYGVSETVFGEWTVMGSMIIFIHSYYN------ 497

  Fly   559 GGLFSAMYLGAKIF----ELVERGKSLKKAIVTFRKNIDSERPPTKDELDAAGALCPICHDAFNT 619
              ::....||.|.|    :.|.:.|||..|              ||::|:....:|.||:...|:
 Frog   498 --VWLRAQLGWKSFLLRRDAVNKIKSLPVA--------------TKEQLEQHNDICSICYQDMNS 546

  Fly   620 PTVLECGHIFCDECVQTWFKREQTCPMCRAK---VSDDPAWQDGSTT 663
            ..:..|.|.|...|::.|...::|||:|..:   :|.....:.||:|
 Frog   547 AVITPCSHFFHPGCLKKWLYVQETCPLCHCQLKSLSQQATGESGSST 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13605NP_651214.2 RING 610..651 CDD:238093 13/43 (30%)
rnf145NP_001072260.1 TRC8_N 8..506 CDD:372682 47/269 (17%)
RING-H2_RNF145 533..575 CDD:319598 12/41 (29%)
rad18 537..>651 CDD:273165 17/57 (30%)
RING-H2 finger (C3H2C3-type) 537..574 CDD:319598 12/36 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 585..610 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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