DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13605 and Rnf139

DIOPT Version :9

Sequence 1:NP_651214.2 Gene:CG13605 / 42858 FlyBaseID:FBgn0039150 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_780435.1 Gene:Rnf139 / 75841 MGIID:1923091 Length:668 Species:Mus musculus


Alignment Length:356 Identity:73/356 - (20%)
Similarity:130/356 - (36%) Gaps:93/356 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 ILSHFVRYLPLIFILFFKFLH--DHLLGIVD-----LLVLQTVMYNVNRSVRNQVARLAQKNYAV 403
            ::|....||.|..:.|.....  |..||.|.     :|.|||.:..:....|  :.||::.    
Mouse   297 VISSIAHYLGLGILAFIGSTEEDDRRLGFVAPVLFFILALQTGLSGLRPEER--LIRLSRN---- 355

  Fly   404 MVRDTFLVAVVVTVRLFLATSPPDPFGLIVPPSRKSVF------IEVTALPFHTSSEGDSPTTSS 462
                   :.:::|..|.......||..:.:..|..|.|      :.|:|..|             
Mouse   356 -------MCLLLTAVLHFIHGMTDPVLMSLSASHVSSFHRHFPVLFVSACLF------------- 400

  Fly   463 EPIKTNMYKDTYKSLNVIPLGMLLYYI-----AVSDLIIKLLTMLVKLIITMLPHHLMRLKVRAR 522
                            ::|  :||.|:     |::..:..:....|:|.:.::        |...
Mouse   401 ----------------ILP--VLLSYVLWHHYALNTWLFAVTAFCVELCLKVI--------VSLT 439

  Fly   523 LYVLVEYISQFYRAM-TPITQWLLFLYESYSGLEVVSG------GLFSAMY-LGAKI-------- 571
            :|.|. .|..:|..: ..:..::.|:..:.:.:|.:.|      |.::.|: .|:||        
Mouse   440 VYTLF-MIDGYYNVLWEKLDDYVYFVRSTGNIIEFIFGVVMFGNGAYTMMFESGSKIRACMMCLH 503

  Fly   572 --FELVERGKSLKKAIVTFR---KNIDSERPPTKDELDAAGALCPICHDAFNTPT-VLECGHIFC 630
              |.:..:.|:..|..:..|   |.|:|........|.....:|.||:..|.|.. :..|.|.|.
Mouse   504 AYFNIYLQVKNGWKTFMNRRTAVKKINSLPEIKGSHLQEIDDVCAICYHEFTTSARITPCNHYFH 568

  Fly   631 DECVQTWFKREQTCPMCRAKVSDDPAWQDGS 661
            ..|::.|...:.|||||..||..:...:|.|
Mouse   569 ALCLRKWLYIQDTCPMCHQKVYIEDEIKDNS 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13605NP_651214.2 RING 610..651 CDD:238093 15/41 (37%)
Rnf139NP_780435.1 TRC8_N 19..516 CDD:290425 48/271 (18%)
zf-rbx1 <544..586 CDD:289448 14/41 (34%)
RING 547..589 CDD:238093 15/41 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 602..668
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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