DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13605 and rnft1

DIOPT Version :9

Sequence 1:NP_651214.2 Gene:CG13605 / 42858 FlyBaseID:FBgn0039150 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_998393.2 Gene:rnft1 / 406509 ZFINID:ZDB-GENE-040426-2324 Length:419 Species:Danio rerio


Alignment Length:478 Identity:124/478 - (25%)
Similarity:196/478 - (41%) Gaps:128/478 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PSMPEPVSPLRYGR----------------------------VSAVSGASSAGAMGRSISLREGE 271
            |..|||.|  |.|.                            |....|:||....||..:.|  .
Zfish    27 PMQPEPSS--REGNGLSLTLQPELLARMPGAGSSSGTETGEDVRVPMGSSSGSTNGRGATSR--R 87

  Fly   272 MR---HNHSLNGGRHNASAIGLNSNPAAFDEREANESQDLDESDGNVENGGGGGNPPEPAENNPE 333
            ||   |:||...| |..|           .|.|:      |..:.::|:|              |
Zfish    88 MRTASHSHSHTHG-HGHS-----------HEHES------DSGESDLESG--------------E 120

  Fly   334 DEHLISDDMVVQILSHFVRY----LPLIFILFFKFLHDHLLGIVDLLVLQTVMYNVNRSVRNQVA 394
            ....||:      |.:.:|:    ||.|.||..|.:..|.||:...:.|.|....||:|::.|  
Zfish   121 SSSSISE------LRYLLRWLKKSLPFIVILCAKLVIQHALGLAVAVGLFTTFMYVNKSIQTQ-- 177

  Fly   395 RLAQKNYAVMVRDTFLVAVVVTVRLFLATSPPDPFGLIVPPSRKSVFIEVTALPFHTSSEGDSPT 459
                    |.:.|.........:.|||.:|              |:.:..|   |||.|      
Zfish   178 --------VFLHDRRTNLHCAWLLLFLTSS--------------SLLVFYT---FHTQS------ 211

  Fly   460 TSSEPIKTNMYKDTY---KSLNVIPLGMLLYYIAVSDLIIKLLTMLVKLIITMLPHHLMRLKVRA 521
                     :|:..:   .:::......:|:.:.|::.|:|.:.|..|.:|.::|..||..:.|.
Zfish   212 ---------LYRCLFFANATIDYHNFWEVLWSVGVTNFILKFIFMGFKCLILLVPCPLMTYRRRG 267

  Fly   522 RLYVLVEYISQFYRAMTPITQWLLFLYESYSGLE----VVSGGLFSAMYLGAKIFELVERGKSLK 582
            :.|:|:|.:.|.|:.:.|:..|..:|. ||..::    :..|.|.:.:||..|:..|.....||:
Zfish   268 QWYMLIEEVGQLYQVIAPVPLWFRYLV-SYDEMDTSVGLTLGILLALLYLIMKLLALYGLSGSLQ 331

  Fly   583 KAIVTFRKNIDSERPPTKDELDAAGALCPICHDAFNTPTVLECGHIFCDECVQTWFKREQTCPMC 647
            |.:.||.....:..|.:..::..||.:||||...|..|.||.|.||||:||:..|..:|:|||:|
Zfish   332 KTLRTFFSPEVNGAPASPAQIREAGDICPICQADFKQPRVLVCQHIFCEECIAQWLNQERTCPLC 396

  Fly   648 RAKVSDD-PAWQDGSTTFFHQLY 669
            |..::|. ..|:||:|:...|:|
Zfish   397 RTVITDKVHKWKDGATSAHLQIY 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13605NP_651214.2 RING 610..651 CDD:238093 22/40 (55%)
rnft1NP_998393.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..120 27/128 (21%)
Required for ubiquitin ligase activity and for protection against ER stress-induced cell death. /evidence=ECO:0000250|UniProtKB:Q5M7Z0 352..403 24/50 (48%)
RING 359..400 CDD:238093 22/40 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593200
Domainoid 1 1.000 71 1.000 Domainoid score I9410
eggNOG 1 0.900 - - E1_KOG4638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I4568
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003057
OrthoInspector 1 1.000 - - otm24847
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15860
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4029
SonicParanoid 1 1.000 - - X1778
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.880

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