Protein Alignment CG13605 and Syvn1

DIOPT Version :10

• Sequence 1: NP_651214.2
• Gene: CG13605 / 42858
• FlyBaseID: FBgn0039150
• Length: 669
• Species: Drosophila melanogaster
• Sequence 2: NP_001426924.1
• Gene: Syvn1 / 361712
• RGDID: 1310488
• Length: 612
• Species: Rattus norvegicus
• Alignment Length: 328
• Identity: 69/328 - (21%)
• Similarity: 120/328 - (36%)
• Gaps: 123/328 - (37%)

  Fly   336 HLISDDMV--------VQILSHFVRYLPLIFILFFKFLHDHLLGIVDLLVLQTVMYNVNRSVRNQ 392
            |.:::|.|        :..|.| .|.:.|:|          ||||:|.|.:....:::
  Rat   117 HWLAEDRVDFMERSPNISWLFH-CRIVSLMF----------LLGILDFLFVSHAYHSI------- 163

  Fly   393 VARLAQKNYAVMVRDTFLVAVVVTVRLFLATSPPDPFGLIVPPSRKSVFIEVTALPFHTSSEGDS 457
                ..:..:|.:...|..|:::|:.|                   ::||:.........||  :
  Rat   164 ----LTRGASVQLVFGFEYAILMTMVL-------------------TIFIKYVLHSVDLQSE--N 203

  Fly   458 PTTSSEPIKTNMYKDTYKSLNVIPLGMLLYYIAVSDLIIKLLTMLVKLIITMLPHHLMRLKVRAR 522
            |..:.                           ||..|..:|.|..:|:::.|.   .|.:.::..
  Rat   204 PWDNK---------------------------AVYMLYTELFTGFIKVLLYMA---FMTIMIKVH 238

  Fly   523 LYVLVEYISQFYRAMTPITQWLLFLYESYSGLEVVSGGLFSAMYLGAKIFELVERGKSLKKAIVT 587
            .:.|.        |:.|                         |||..:.|:     |::..||::
  Rat   239 TFPLF--------AIRP-------------------------MYLAMRQFK-----KAVTDAIMS 265

  Fly   588 FR--KNIDSERP-PTKDELDAAGALCPICHDAFNTPTV-LECGHIFCDECVQTWFKREQTCPMCR 648
            .|  :|:::..| .|.:||.|...:|.||.:...|... |.|.|||...|:::||:|:||||.||
  Rat   266 RRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

  Fly   649 AKV 651
            ..|
  Rat   331 MDV 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG13605	NP_651214.2	HRD1	<571..>664	CDD:227568	31/85 (36%)
		RING-HC_RNFT1-like	608..648	CDD:438194	17/40 (43%)
Syvn1	NP_001426924.1	None