DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13605 and Chfr

DIOPT Version :10

Sequence 1:NP_651214.2 Gene:CG13605 / 42858 FlyBaseID:FBgn0039150 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001424199.1 Gene:Chfr / 288734 RGDID:1306360 Length:664 Species:Rattus norvegicus


Alignment Length:134 Identity:31/134 - (23%)
Similarity:43/134 - (32%) Gaps:47/134 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 VVSGGLFSAMYLGAKIFELVERGKSLKKAIVTFRKNIDSERPPTKDELDAAGAL----------- 609
            :|:.|..|::   :.:|:..|...||.|...|      .|..|.|.::...|.|           
  Rat   221 LVANGELSSL---SSVFQDNEASFSLLKTEDT------EELEPAKKKMKGDGELDLNLQLSVADQ 276

  Fly   610 --------------------------CPICHDAFNTPTVLE-CGHIFCDECVQTWFKREQTCPMC 647
                                      |.||.|..:....|: |.|.||..|...|.:|...||.|
  Rat   277 RGIAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTC 341

  Fly   648 RAKV 651
            |..|
  Rat   342 RCPV 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13605NP_651214.2 HRD1 <571..>664 CDD:227568 28/119 (24%)
RING-HC_RNFT1-like 608..648 CDD:438194 15/77 (19%)
ChfrNP_001424199.1 None

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