DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13605 and sel-11

DIOPT Version :9

Sequence 1:NP_651214.2 Gene:CG13605 / 42858 FlyBaseID:FBgn0039150 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_505969.1 Gene:sel-11 / 179612 WormBaseID:WBGene00004768 Length:610 Species:Caenorhabditis elegans


Alignment Length:335 Identity:69/335 - (20%)
Similarity:126/335 - (37%) Gaps:83/335 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 VNRSVRNQVARLAQKNYAVMVRDTFLVAVVVTVRLFLATSPPDPFGLIVPPSRKSV-FIEVTALP 448
            :|:.....:..|::.|.::.|   ..|..:|.|.|.        |.|:     ||: |.::.|..
 Worm    26 INKQFYPSIVYLSKSNASMAV---IYVQGIVLVYLM--------FQLL-----KSILFGDLRAAE 74

  Fly   449 FHTSSEGDSPTTSSEPIKTNMYKDTYKSLNVIPLGMLLYYIAVSDLIIKLLTMLVKLIITMLPHH 513
            ....||..........:...:::|.:.::.|:....||:......|....:.|:.:..:..|..|
 Worm    75 AEHLSERTWHAVLETCLAFTVFRDDFSAIFVMQFIGLLFIKCFHWLADDRVDMMERSPVITLRFH 139

  Fly   514 LMRLKVRAR--------------------------------------LYVLVEYISQFYRAMTPI 540
            |..:.|.|.                                      |:|.::|:...:....| 
 Worm   140 LRMMTVLAALGFADSYFVSSAYFTTITRGASAQIVFGFEYAILLALVLHVTIKYLLHMHDLRNP- 203

  Fly   541 TQW------LLFLYESYSGLEVVSGGLFSAMYLGAKIFEL------VERGKSLKKA---IVTFRK 590
            ..|      ||:.....:.:..:..|.|:.:.|....|.|      .:..::|.||   ::..|:
 Worm   204 QSWDNKAVYLLYAELFINLIRCLLYGFFAVVMLRVHTFPLFSVRPFYQSVRALHKAFLDVILSRR 268

  Fly   591 NI---DSERP-PTKDELDAAGALCPICHDAFN---TPTVLECGHIFCDECVQTWFKREQTCPMCR 648
            .|   :|:.| .:.::|.|..|.|.||.:...   :|..|.|.|:|...|:::||:|:||||.||
 Worm   269 AINAMNSQFPVVSAEDLAAMDATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCR 333

  Fly   649 AKVSDDPAWQ 658
            ..:     ||
 Worm   334 TDI-----WQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13605NP_651214.2 RING 610..651 CDD:238093 18/43 (42%)
sel-11NP_505969.1 HRD1 51..>333 CDD:227568 60/295 (20%)
zf-RING_2 291..333 CDD:290367 16/41 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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