DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13605 and zmp:0000000662

DIOPT Version :9

Sequence 1:NP_651214.2 Gene:CG13605 / 42858 FlyBaseID:FBgn0039150 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_001342512.2 Gene:zmp:0000000662 / 100002825 ZFINID:ZDB-GENE-130530-665 Length:700 Species:Danio rerio


Alignment Length:357 Identity:74/357 - (20%)
Similarity:142/357 - (39%) Gaps:70/357 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 VQILSHF-----VRYLPLIFILF--------------FKFLHDH-LLGIVDLLVLQTVMYNVNRS 388
            ||::::|     |:..||:::|.              ..|:..: .||::.|.......:|    
Zfish   238 VQLITNFGTITAVQQGPLLYLLTSVSECCASPYSLLGLTFVVSYTALGLLSLCKFYLGGFN---- 298

  Fly   389 VRNQVARLAQKNYAVMVRDTFLVAVVVTVRLFLATSPPDPFGLIVPPSRKSVFIEVTALPFHTSS 453
                    |.:|:.||.|.   |...||: |.||...    ||:...:.:..|:....|....:|
Zfish   299 --------ALQNHNVMHRG---VTEGVTL-LLLALQT----GLLDMAALQRCFLLFIILFIVLTS 347

  Fly   454 EGDSPTTSSEPIKTNM----YKDTYKSLNVIPL-GMLLYYIA-VSDLIIKLLTMLVKLIITMLPH 512
            ...|.:..:||:...:    .:..:|.|..:.: |.||.:.. ::..|.:...|...|:|.:...
Zfish   348 TLQSMSEITEPVVLGLGASRNRSVWKHLRGLSMCGFLLLFPGFMAYKISQFFNMDFWLLILVSSC 412

  Fly   513 HLMRLKVRARLYVLVEYISQFYR--AMTPITQWLLFLYESYSGLE------VVSGGLFSAM---- 565
            .|..|:|...|.:...::.:.:|  |:..:.:.:.::......||      ||:.|.:.::    
Zfish   413 MLTSLQVTGTLLIYSLFMVEVWRGSALPGLDEIVYYVNGVCRVLEFAVAVCVVAYGAWESLWGEW 477

  Fly   566 -YLGAKIFEL---------VERG-KSLKKAIVTFRKNIDSERPPTKDELDAAGALCPICHDAFNT 619
             ::||.:..:         .:.| ||........|| |:.....:.::|.....:|.||.....:
Zfish   478 SWMGASVIIIHSYCNVWLRAQAGWKSFLLRQEAARK-INILPKASAEQLQDHNDVCAICFQDMTS 541

  Fly   620 PTVLECGHIFCDECVQTWFKREQTCPMCRAKV 651
            ..:..|||.|...|::.|...::|||||...:
Zfish   542 AVITYCGHFFHGNCLRKWLYVQETCPMCHTSI 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13605NP_651214.2 RING 610..651 CDD:238093 14/40 (35%)
zmp:0000000662XP_001342512.2 TRC8_N 5..501 CDD:290425 53/282 (19%)
zf-rbx1 <529..570 CDD:289448 13/40 (33%)
RING 532..573 CDD:238093 14/40 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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