DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10694 and UBQ9

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_568552.1 Gene:UBQ9 / 833742 AraportID:AT5G37640 Length:322 Species:Arabidopsis thaliana


Alignment Length:287 Identity:58/287 - (20%)
Similarity:120/287 - (41%) Gaps:63/287 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65
            |::..:.|.::|||:::..|..:..:|.|:.::.  .:|.:..:||:||::::|...|::|.|.:
plant     3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIE--GIPLDQQRLIFSGKLLDDGRTLADYSIQK 65

  Fly    66 DKII---------------VLMGKK---KVDKSSPEEKVAPTPPLAAGPNVLRTEDVVPSLAPND 112
            |.|:               .|.||.   :|:.|...:.|...         ::.::.||   |:.
plant    66 DSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAK---------IQDKEGVP---PDQ 118

  Fly   113 QWVSDLMSMGYGEEEVRSALRASFNHPERAIEYLI---NGIPQ---EVVSEQGLAAIPSVQTSDQ 171
            |   .|:..|...::.|:.  |.:|..:.:..:|:   .|..|   ..::.:.:|.  .|::||.
plant   119 Q---RLIFAGKQLDDGRTL--ADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIAL--EVESSDT 176

  Fly   172 LQQLMADLNITRMREMINQNPELIHRLMNRLAET-----DPATFEVFQRNQEELMNMI---SGGA 228
            ...:.|.:          |:.|.|.....||...     |..|...:...:|..::::   .||.
plant   177 TDNVKAKI----------QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGM 231

  Fly   229 SRTPNEIEHLQITLTAEETAAVGRLEA 255
            ....|.:....|||..|.:..:..::|
plant   232 QIFVNTLTGKTITLEVESSDTIDNVKA 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 58/287 (20%)
UBQ9NP_568552.1 Ubl1_cv_Nsp3_N-like 3..78 CDD:475130 19/76 (25%)
Ubl_ubiquitin 79..154 CDD:340501 16/91 (18%)
Ubl_ubiquitin 155..230 CDD:340501 14/86 (16%)
Ubl1_cv_Nsp3_N-like 231..307 CDD:475130 6/28 (21%)

Return to query results.
Submit another query.