DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and AT4G05270

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_192436.1 Gene:AT4G05270 / 825875 AraportID:AT4G05270 Length:129 Species:Arabidopsis thaliana


Alignment Length:193 Identity:34/193 - (17%)
Similarity:67/193 - (34%) Gaps:67/193 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65
            ||..:..|:..:..||::....:..:|||:          |..|.|          |:|:..:..
plant     1 MKFLVENLNGSSFELEVDYRDTLLVVKQKI----------ERSQHI----------PVSKQTLIV 45

  Fly    66 DKIIVLMGKKKVDKSSPEEKVAPTPPLAAGPNVLRTEDVVPSLAPNDQWVSDLMSMGYGEEEVRS 130
            |.|::|    :.|.:..:.::.|            |.|:...::.:|.                 
plant    46 DGIVIL----REDLTVEQCQIVP------------TSDIQLEVSSDDD----------------- 77

  Fly   131 ALRASFNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSDQLQQLMADLNITRMREMINQNPE 193
                :.||         |...|:..:||. .|:|.|...:..::....|....:|::.:..||
plant    78 ----NPNH---------NDCDQKPQTEQS-PALPLVSAEEYFERQDWPLTAEELRQIYSYRPE 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 34/193 (18%)
UBQ 1..76 CDD:294102 16/74 (22%)
UBA1_Rad23_like 110..148 CDD:270466 3/37 (8%)
XPC-binding 172..227 CDD:286376 4/22 (18%)
UBA2_Rad23_like 245..282 CDD:270467
AT4G05270NP_192436.1 ubiquitin 3..73 CDD:395184 18/105 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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