DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and AT4G05250

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_192434.1 Gene:AT4G05250 / 825873 AraportID:AT4G05250 Length:318 Species:Arabidopsis thaliana


Alignment Length:257 Identity:43/257 - (16%)
Similarity:90/257 - (35%) Gaps:52/257 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAEDKIIVLMGKKKVDK 79
            :|:.....:..:|:|:....  .:|.....||:.|.:::|.:.:.:..|.....|.:.       
plant    15 IELGYWDTMLEIKEKIEKYQ--CIPVSKQTLIFQGVVLQDHLDIKQCVILNHSHIQIF------- 70

  Fly    80 SSPEEKVAPTP-PLAAGPNVLRTEDVVP--SLAPNDQW----VSDLMSMGYGEEE--VRSALRAS 135
                  |.|.| |......||:|:...|  |....|.:    ||..:..|...::  ::......
plant    71 ------VEPNPNPNPNNAQVLQTDISSPLNSFIDIDNFLDSPVSTSVKFGINNDDHVLQPEKSTP 129

  Fly   136 FNHPERAIEY-----------LINGIPQEVVSEQGLAAIPSVQTSDQLQQLMADLNITRMREMIN 189
            || ..:.|:|           |::....:|...:......|.:..|.:|    |..::...|:::
plant   130 FN-SSKEIDYFQEYPISTSMELVSNNSDQVPQPEKSTPFNSYEEIDYIQ----DYPVSTSMELVS 189

  Fly   190 QNPELI-----HRLMNRLAETD-------PATFEVFQRNQEELMNMISGGASRTPNEIEHLQ 239
            .|.:.:     ...:|...|.|       ..:.|:...|.:::..........:..||::.|
plant   190 NNSDQVPPPEKSPPLNSSKEIDYFQEYPVSTSMELVSNNIDQVPQPEKSPPLNSSKEIDYFQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 43/257 (17%)
UBQ 1..76 CDD:294102 10/60 (17%)
UBA1_Rad23_like 110..148 CDD:270466 9/54 (17%)
XPC-binding 172..227 CDD:286376 9/66 (14%)
UBA2_Rad23_like 245..282 CDD:270467
AT4G05250NP_192434.1 UBQ 1..59 CDD:214563 8/45 (18%)
ubiquitin 7..>61 CDD:278661 8/47 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10621
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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