DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and rad23b

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001025578.1 Gene:rad23b / 594966 XenbaseID:XB-GENE-984319 Length:416 Species:Xenopus tropicalis


Alignment Length:432 Identity:110/432 - (25%)
Similarity:186/432 - (43%) Gaps:161/432 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEV-----AMPAENLQLIYSGRIMEDAMPLSE 60
            |:::::.|.|:|..::::..:.|:|||:|:    |:     |.|....:|||:|:|:.|...|.|
 Frog     1 MQITLKTLQQQTFKIDIDGEETVKALKEKI----ELEKGKDAFPVAGQKLIYAGKILNDDTALKE 61

  Fly    61 YRIAEDKIIVLMGKK-------------------------------------------------- 75
            |:|.|...:|:|..|                                                  
 Frog    62 YKIDEKNFVVVMVTKPKGAACSSTPTPAASQPASAAAPAPASPPLTYTPIARQNAPIPLPVPFSI 126

  Fly    76 -------------------KVDK-----SSPEEKVAPT------PPLAAGPNVLRTEDVVPSLAP 110
                               |.:|     .||:|.|:|:      |..::.|::.  ||...:|..
 Frog   127 PAVPAPAAPTSEPSTTTAPKEEKPEEKTDSPQETVSPSSTECSLPTDSSRPSLF--EDATSALVT 189

  Fly   111 NDQW---VSDLMSMGYGEEEVRSALRASFNHPERAIEYLINGIPQ----EVVSE--QGLAAIPS- 165
            ...:   |:::|||||..|:|.:|||||||:|:||:|||:.|||.    :.|:|  |.|::.|: 
 Frog   190 GQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPSDREGQAVAEPPQTLSSTPTQ 254

  Fly   166 ---------------------------VQTSDQLQQLMADLNITRMREMINQNPELIHRLMNRLA 203
                                       :|...|.||         ||::|.|||.|:..|:.::.
 Frog   255 PLPAAAGAAATTTTPSTPSTGGNPLDFLQNQPQFQQ---------MRQIIQQNPSLLPALLQQIG 310

  Fly   204 ETDPATFEVFQRNQEELMNMI------SGG----------------ASRTPNEIEHLQITLTAEE 246
            ..:|:..:...::||:.:.|:      |||                |......:.::|:  |.:|
 Frog   311 RENPSLLQQISQHQEQFIQMLNDPVPESGGQGGGGGGGGGGGRGIAAEAGSGHMNYIQV--TPQE 373

  Fly   247 TAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEED 288
            ..|:.||:||||...:.:|||.||:|:|.|||..|::|:.:|
 Frog   374 KEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDD 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 108/426 (25%)
rad23bNP_001025578.1 rad23 1..414 CDD:273167 109/429 (25%)

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