DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10694 and rad23aa

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001003739.1 Gene:rad23aa / 445284 ZFINID:ZDB-GENE-040808-59 Length:362 Species:Danio rerio


Alignment Length:365 Identity:106/365 - (29%)
Similarity:175/365 - (47%) Gaps:81/365 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKL-GNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIA 64
            |:::::.|.|:||.:::::.|.|:|||:|: ......:.|....:|||:|:|::|..|:.||:|.
Zfish     1 MQITLKTLQQQTIQIDIDDEQTVKALKEKIEAEKGRDSFPVAGQKLIYAGKILQDDTPIKEYKID 65

  Fly    65 EDKIIVLMGKK------KVDKSSPEEKVA-----------PTPPLAAGPNVLRTED--------- 103
            |...:|:|..|      ....|.|...:|           |.||.|..|..:...|         
Zfish    66 EKNFVVVMVSKTKSPGTSAAPSEPSRSMAASSSSSSSSPPPPPPPAPAPAAIPFTDECPRDDPPA 130

  Fly   104 -VVPSLAPN----------------------DQWVSDLMSMGYGEEEVRSALRASFNHPERAIEY 145
             |.|:.:|:                      |..::::|||||..::|.:||:||:|:|.||:||
Zfish   131 TVSPASSPDGGTDVVGEGEDASSTLVTGQEYDAMLTNIMSMGYERDKVVAALKASYNNPHRAVEY 195

  Fly   146 LINGIPQEVVSE--QGLAAIPS----VQTSDQLQQLMADLNITRMREMINQNPELIHRLMNRLAE 204
            |:||||...|.|  ...|.:|:    .:..:.|:.|.:......||::|.|||.|:..|:.:|.:
Zfish   196 LLNGIPTVPVQETNPAPAQLPTDTQPTEGENPLEFLRSQPQFQSMRQVIQQNPSLLPALLQQLGQ 260

  Fly   205 TDPATFEVFQRNQEELMNMISG---------------------GASRTPNEIEHLQITLTAEETA 248
            .:|...:...::||..:.|::.                     |....|...    |.:|.:|..
Zfish   261 ENPELLQQISQHQELFIQMLNAPVGEGEGELGEGGEFADLGAIGDEAAPGSF----IQVTQQEKE 321

  Fly   249 AVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEED 288
            |:.||:||||...:.||||.||:|:|.|||..|:.|:.||
Zfish   322 AIERLKALGFSEALVVQAYFACEKNENLAANFLLNQNFED 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 103/359 (29%)
rad23aaNP_001003739.1 rad23 1..360 CDD:273167 104/362 (29%)

Return to query results.
Submit another query.