DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10694 and zgc:56596

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_956594.1 Gene:zgc:56596 / 393270 ZFINID:ZDB-GENE-040426-1089 Length:157 Species:Danio rerio


Alignment Length:197 Identity:46/197 - (23%)
Similarity:79/197 - (40%) Gaps:54/197 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65
            |.|:::.|..:...:::.|:::|..:|:.:..  .:.:||...:|:|.|:.:.|...||:|.|  
Zfish     1 MILTVKPLQGKECNVQVTENEKVSTVKELVSE--RLNIPASQQRLLYKGKALADEHRLSDYSI-- 61

  Fly    66 DKIIVLMGKKKVDKSSPEEK----VAPTPPLAAGPNVLRTEDVVPSLAPNDQWVSDLMSMGYGEE 126
                           .||.|    |.|....::|.       |..|.|.||:.       |.|..
Zfish    62 ---------------GPEAKLNLVVRPAGERSSGA-------VGTSSANNDKG-------GSGVW 97

  Fly   127 EVRSALRASFNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSDQLQQLMADLNITRMREMINQN 191
            ::.|.:.|....|..|.:          |.||   .|...:.|  |:||..| :|.|:...: .:
Zfish    98 QLLSTVLAKHFSPADAAK----------VQEQ---LIKDYERS--LRQLSLD-DIERLASRL-LH 145

  Fly   192 PE 193
            ||
Zfish   146 PE 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 46/197 (23%)
UBQ 1..76 CDD:294102 16/74 (22%)
UBA1_Rad23_like 110..148 CDD:270466 8/37 (22%)
XPC-binding 172..227 CDD:286376 8/22 (36%)
UBA2_Rad23_like 245..282 CDD:270467
zgc:56596NP_956594.1 GDX_N 1..74 CDD:176402 20/91 (22%)
UBQ 1..72 CDD:214563 19/89 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.