DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and RpS27A

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster


Alignment Length:92 Identity:26/92 - (28%)
Similarity:54/92 - (58%) Gaps:10/92 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65
            |::.::.|..:|||||:..|..:..:|.|:.:  :..:|.:..:||::|:.:||...||:|.|.:
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD--KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

  Fly    66 DK----IIVLMG----KKKVDKSSPEE 84
            :.    ::.|.|    :||.:.|:|::
  Fly    64 ESTLHLVLRLRGGAKKRKKKNYSTPKK 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 26/92 (28%)
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 21/76 (28%)
Ribosomal_S27 103..147 CDD:460261
Blue background indicates that the domain is not in the aligned region.

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