DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and CG11700

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster


Alignment Length:278 Identity:52/278 - (18%)
Similarity:110/278 - (39%) Gaps:45/278 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65
            |::.::.|..:|||||:..|..:..:|.|:.:..|  .|.|:.:||:.|:.:|:...||:|.|.:
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEE--NPPEHQRLIFGGKHLENGRTLSDYNIQK 63

  Fly    66 DKIIVLM---------------GKKKVDKSSPEEKVAPTPPLAAGPNVLRTEDVVPSLAPNDQWV 115
            :..|.|:               ||....:..|.:.:               |:|...:...::..
  Fly    64 ESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI---------------ENVKAKIQDKEENP 113

  Fly   116 SDLMSMGYGEEEVRSALRAS-FNHPERAIEYLI----NGIPQEVVSEQGLAAIPSVQTSDQLQQL 175
            .:...:.:|.:.:.:....| :|..:.:..||:    .|:...|.:..|......|:.||.::.:
  Fly   114 PEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENV 178

  Fly   176 MADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMI---SGGASRTPNEIEH 237
            .|     |:.:.....|:....:.......|..|...:...:|..::::   .||.......:..
  Fly   179 KA-----RIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

  Fly   238 LQITLTAEETAAVGRLEA 255
            ..|||..|.:..:..::|
  Fly   239 KTITLEVEPSDTIKHVKA 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 52/278 (19%)
UBQ 1..76 CDD:294102 25/89 (28%)
UBA1_Rad23_like 110..148 CDD:270466 5/42 (12%)
XPC-binding 172..227 CDD:286376 6/57 (11%)
UBA2_Rad23_like 245..282 CDD:270467 2/11 (18%)
CG11700NP_572306.1 Ubiquitin 1..76 CDD:176398 23/76 (30%)
UBQ 1..72 CDD:214563 23/72 (32%)
Ubiquitin 77..152 CDD:176398 10/89 (11%)
UBQ 77..148 CDD:214563 10/85 (12%)
Ubiquitin 153..228 CDD:176398 11/79 (14%)
UBQ 153..224 CDD:214563 11/75 (15%)
UBQ 229..296 CDD:214563 5/28 (18%)
UBQ 229..296 CDD:294102 5/28 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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