DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and Ubqln3

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_017444687.1 Gene:Ubqln3 / 308905 RGDID:1304920 Length:678 Species:Rattus norvegicus


Alignment Length:232 Identity:57/232 - (24%)
Similarity:107/232 - (46%) Gaps:51/232 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAEDKIIVLMGKKKVDKSSPEEKVA 87
            :|.||:|:.:..: |.| ..|.||::|:|::|...|::..:.:...:.|:.|.:...:..|   .
  Rat    66 IRQLKEKISHRFK-AHP-NQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKMQRRTTGTE---C 125

  Fly    88 PTPPLAA-GPNVLRTEDVVPSLAPNDQW---------------VSDL-MSMGYGEEEVRSALRAS 135
            |.||::. |||.|.    :|.  ||..:               :|.| ::.|...::..|.:...
  Rat   126 PAPPVSTPGPNPLE----LPQ--PNSAYPVDGSPSFSLGVLTGLSGLGLTSGSFSDQPGSLMWQH 184

  Fly   136 FNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSDQLQQLMADLNITRMREMINQNPELIHRLMN 200
            .:.||...:.:.:...|.::|..||           ::||:  |:...|:::|.||||:.|.|.|
  Rat   185 MSVPELVAQLVDDPFIQGLLSNTGL-----------MRQLV--LDNPHMQQLIQQNPEIGHILNN 236

  Fly   201 R--LAET-----DPATFEVFQRNQEE-LMNM--ISGG 227
            .  :.:|     :|:..:...|:|:. |.|:  |.||
  Rat   237 PEIMRQTMEFLRNPSMMQEMMRSQDRALSNLESIPGG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 57/232 (25%)
Ubqln3XP_017444687.1 Ubl_PLICs 43..115 CDD:340506 14/50 (28%)
UBI4 65..>176 CDD:444084 29/120 (24%)
STI1 217..>258 CDD:450205 11/40 (28%)
UBA_PLICs 638..675 CDD:270582
Blue background indicates that the domain is not in the aligned region.

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