DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG10694 and Ubd

DIOPT Version :9

Sequence 1:	NP_651212.1	Gene:	CG10694 / 42855	FlyBaseID:	FBgn0039147	Length:	290	Species:	Drosophila melanogaster
Sequence 2:	NP_445751.2	Gene:	Ubd / 29168	RGDID:	69418	Length:	161	Species:	Rattus norvegicus

Alignment Length:	176	Identity:	36/176 - (20%)
Similarity:	70/176 - (39%)	Gaps:	52/176 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 ITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAEDKIIVLMGKKKV 77
            :|.:...|.:|:.:.:.:.:..:|::  ::..|:...:|::....||.|.|.::..|.|  ..||
  Rat    16 MTFDTTMSDKVKKINEHIRSQTKVSV--QDQILLLDSKILKPHRALSSYGIDKENTIHL--TLKV 76

  Fly    78 DKSSPEEKVAPTPPLAAGPNVLRTEDVVPSLAPNDQWVSDLMSMGYGEEEVRSALRASFNHPERA 142
            .|.|.||.     ||:          :|.|                |:|..|..||...:.....
  Rat    77 VKPSDEEL-----PLS----------LVES----------------GDEGQRHLLRVRRSSSVAQ 110

  Fly   143 IEYLINGIPQEVVSEQGLAAIPSVQ-----TSDQLQ--QLMADLNI 181
            ::.:|          :.:.|:|..:     ...:|:  ::|||.||
  Rat   111 VKEMI----------ENVTAVPPKKQFVNCNGKRLEDGKIMADYNI 146

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG10694	NP_651212.1	rad23	1..284	CDD:273167	36/176 (20%)
		UBQ	1..76	CDD:294102	12/62 (19%)
		UBA1_Rad23_like	110..148	CDD:270466	5/37 (14%)
		XPC-binding	172..227	CDD:286376	6/12 (50%)
		UBA2_Rad23_like	245..282	CDD:270467
Ubd	NP_445751.2	UBQ	8..75	CDD:214563	12/62 (19%)
		UBQ	17..75	CDD:294102	12/61 (20%)
		UBQ	92..154	CDD:214563	14/65 (22%)
		ubiquitin	95..154	CDD:278661	12/62 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900