DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10694 and rhp23

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_596231.1 Gene:rhp23 / 2540481 PomBaseID:SPBC2D10.12 Length:368 Species:Schizosaccharomyces pombe


Alignment Length:370 Identity:102/370 - (27%)
Similarity:176/370 - (47%) Gaps:84/370 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITL-EMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIA 64
            |.|:.:.|.|:...: :::...::..||:|:..  :.....|..:|||||||:.|...:.||.|.
pombe     1 MNLTFKNLQQQKFVISDVSADTKISELKEKIQT--QQNYEVERQKLIYSGRILADDKTVGEYNIK 63

  Fly    65 E-DKIIVLMGKKKVDKSSPEEKVAPTP-PLAAGP------------NVLRTEDVVPSLAPNDQ-- 113
            | |.|:.::.:.|...|:|:...:|.| |.|:.|            ....|...|.:.||::.  
pombe    64 EQDFIVCMVSRPKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAAAAPSNPDT 128

  Fly   114 ---------------------WVSDLMSMGYGEEEVRSALRASFNHPERAIEYLINGIPQEVVS- 156
                                 .|.:::.|||...||..|:||:||:|:||:|||:.|||::::: 
pombe   129 TATSEAPIDANTLAVGAQRNVAVENMVEMGYERSEVERAMRAAFNNPDRAVEYLLTGIPEDILNR 193

  Fly   157 --EQGLAAIPSVQ--------TS----------------------------DQLQQLMADLNITR 183
              |:..||:.:.|        ||                            |.|..|.:.....:
pombe   194 QREESAAALAAQQQQSEALAPTSTGQPANLFEQAALSENENQEQPSNTVGDDPLGFLRSIPQFQQ 258

  Fly   184 MREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMISGGA---SRTPNEIEHLQITLTAE 245
            :|:::.|||:::..::.::.:.|||..:...:|.|..:.:::.||   |..|:  ..:||.:|.|
pombe   259 LRQIVQQNPQMLETILQQIGQGDPALAQAITQNPEAFLQLLAEGAEGESALPS--GGIQIQITQE 321

  Fly   246 ETAAVGRLEALGFERVMAVQAYLACDKDEQLAAEVLIRQSEEDRD 290
            |:.::.||..|||:|.:.:||||||||:|:|||..|.....|..|
pombe   322 ESESIDRLCQLGFDRNIVIQAYLACDKNEELAANYLFEHGHESED 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 100/362 (28%)
rhp23NP_596231.1 rad23 1..363 CDD:273167 100/365 (27%)

Return to query results.
Submit another query.