DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and Ubqlnl

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_941026.2 Gene:Ubqlnl / 244179 MGIID:2685336 Length:610 Species:Mus musculus


Alignment Length:255 Identity:60/255 - (23%)
Similarity:90/255 - (35%) Gaps:76/255 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAEDKIIVLMGKKKVDKSSPEEKVA 87
            ||..|:.|....:..|  |.|.|::.||:::|...||:..|.:..||.::.|.|           
Mouse    52 VRQFKEILSAHFKCQM--EQLVLVFMGRLLKDHDTLSQRGITDGHIIHVVIKSK----------- 103

  Fly    88 PTPPLAAGPNVLRTEDVVPSLAPNDQWVSD----------LMSMGYGEEEVRSALRASFNHPERA 142
                  .||..|...  ..:|..|:....|          ..|.|..|.:|.|:|......|:..
Mouse   104 ------HGPRSLAHS--FRNLVTNNPCHQDRNPKGNSSMVCQSAGMNETKVESSLLMEPEAPKVG 160

  Fly   143 IEYLINGIPQEVVSEQGLAAIPSVQTSDQL--QQLMADLNITR--------MREMINQNPELIHR 197
            .|      ..||.|.:.:|     |..:.|  |.|:::::...        |.|:|.||||:.|.
Mouse   161 TE------SPEVGSLEHIA-----QVLENLCVQSLLSNMDFVHQMPPEQPYMEELIQQNPEVSHL 214

  Fly   198 LMNR--LAET-----------------DPATFEVFQRNQEELMNMISGGASRTPNEIEHL 238
            |.|.  |.:|                 .||....:..|.:..:     |....||...||
Mouse   215 LDNSEILCQTLELVRHLAIIQEIMQIQQPAQNPEYPPNSQPFL-----GLETVPNGNNHL 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 60/255 (24%)
UBQ 1..76 CDD:294102 17/52 (33%)
UBA1_Rad23_like 110..148 CDD:270466 10/47 (21%)
XPC-binding 172..227 CDD:286376 18/83 (22%)
UBA2_Rad23_like 245..282 CDD:270467
UbqlnlNP_941026.2 UBQ 31..101 CDD:214563 16/50 (32%)
UBQ 31..101 CDD:294102 16/50 (32%)
UBA_PLICs 567..606 CDD:270582
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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