DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and Rad23b

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_033037.2 Gene:Rad23b / 19359 MGIID:105128 Length:416 Species:Mus musculus


Alignment Length:416 Identity:111/416 - (26%)
Similarity:177/416 - (42%) Gaps:128/416 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKL-GNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIA 64
            |:::::.|.|:|..::::..:.|:|||:|: ....:.|.|....:|||:|:|:.|...|.||:|.
Mouse     1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALKEYKID 65

  Fly    65 EDKIIVLMGKK--------------------KVDKSSP----EEKVAPTP--------------- 90
            |...:|:|..|                    ....|||    .:..||||               
Mouse    66 EKNFVVVMVTKPKAVTTAVPATTQPSSTPSPTAVSSSPAVAAAQAPAPTPALPPTSTPASTAPAS 130

  Fly    91 ------PLAAGPN-------------VLRT-----------------EDVVPSLAPNDQW---VS 116
                  |..||..             ||.:                 ||...:|.....:   |:
Mouse   131 TTASSEPAPAGATQPEKPAEKPAQTPVLTSPAPADSTPGDSSRSNLFEDATSALVTGQSYENMVT 195

  Fly   117 DLMSMGYGEEEVRSALRASFNHPERAIEYLINGIP-----QEVV------------SEQGLAAIP 164
            ::|||||..|:|.:|||||||:|:||:|||:.|||     |.||            ....:||..
Mouse   196 EIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVDPPPQAVSTGTPQSPAVAAAA 260

  Fly   165 SVQTS--------DQLQQLMADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELM 221
            :..|:        ..|:.|.......:||::|.|||.|:..|:.::...:|...:...::||..:
Mouse   261 ATTTATTTTTSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFI 325

  Fly   222 NMIS----------------------GGASRTPNEIEHLQ-ITLTAEETAAVGRLEALGFERVMA 263
            .|::                      ||.........|:. |.:|.:|..|:.||:||||...:.
Mouse   326 QMLNEPVQEAGSQGGGGGGGGGGGGGGGGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLV 390

  Fly   264 VQAYLACDKDEQLAAEVLIRQS-EED 288
            :|||.||:|:|.|||..|::|: :||
Mouse   391 IQAYFACEKNENLAANFLLQQNFDED 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 108/409 (26%)
UBQ 1..76 CDD:294102 25/95 (26%)
UBA1_Rad23_like 110..148 CDD:270466 21/40 (53%)
XPC-binding 172..227 CDD:286376 14/76 (18%)
UBA2_Rad23_like 245..282 CDD:270467 18/36 (50%)
Rad23bNP_033037.2 rad23 1..414 CDD:273167 109/412 (26%)
RAD23_N 1..78 CDD:176400 25/76 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..175 12/91 (13%)
UBA1_Rad23 189..228 CDD:270560 21/38 (55%)
XPC-binding 276..331 CDD:286376 14/54 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..356 2/22 (9%)
UBA2_HR23B 372..416 CDD:270611 20/43 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849955
Domainoid 1 1.000 49 1.000 Domainoid score I11720
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53856
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001474
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101279
Panther 1 1.100 - - O PTHR10621
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1097
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.740

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