DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and rad-23

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_496488.2 Gene:rad-23 / 174785 WormBaseID:WBGene00013924 Length:323 Species:Caenorhabditis elegans


Alignment Length:325 Identity:94/325 - (28%)
Similarity:162/325 - (49%) Gaps:41/325 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRIAE 65
            :.::.|.|.|....||:||.|.:..:|..:.:........|..:|||:|:|::|::.:.|.....
 Worm     3 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGEVGFDS 67

  Fly    66 DK-IIVLMGKKKVDKSSPEEKVAPTP---PLAAGP--NVLRTEDVVPSLA----------PNDQW 114
            .| ::|::.|:||.:.:|...||...   |:||.|  |.....||.|..|          ..::.
 Worm    68 SKFVVVMLSKRKVTEVAPSSTVATAAEPVPVAAAPASNPAPAADVAPEAAAPAEAEALTDEQEEN 132

  Fly   115 VSDLMSMGYGEEEVRSALRASFNHPERAIEYLINGIPQEVVS-------EQGLAAIPSVQTSDQL 172
            |..:..|||..|:..:||||:|.:|:||:|:|:||:|.:...       ||.:..:.. ..:|.|
 Worm   133 VLAITGMGYDREQTIAALRAAFWNPDRAVEFLLNGLPDDAADQEPDLGPEQNIDNVDE-DGNDDL 196

  Fly   173 QQLMADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMNMISGGAS-------- 229
            ..|.....:..:|.:|.||||::..::.:||..:|...:..|.||:..|::::|||.        
 Worm   197 NMLANMPQLAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLLNGGAQGAGAAAGN 261

  Fly   230 ----RTPNEIEHLQITLTAEETAAVGRLEAL--GFERVMAVQAYLACDKDEQLAAEVLIRQSEED 288
                .||.  .|: |.|:.||.||:.|::|:  .....:.|:||.||||:|:.|...:....:|:
 Worm   262 APERNTPR--RHV-IHLSPEEAAAIERIKAIVVNAPEAVVVEAYFACDKNEEAAINFIFSNLDEE 323

  Fly   289  288
             Worm   324  323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 93/319 (29%)
rad-23NP_496488.2 rad23 3..319 CDD:273167 93/319 (29%)

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