DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and F52C6.2

DIOPT Version :9

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_494128.3 Gene:F52C6.2 / 173558 WormBaseID:WBGene00018659 Length:228 Species:Caenorhabditis elegans


Alignment Length:238 Identity:53/238 - (22%)
Similarity:89/238 - (37%) Gaps:57/238 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLSIRMLDQRTITLEMNES--QEVRALKQKLGNLPEVAMPAENLQLIYSGRIMEDAMPLSEYRI 63
            |.|||:....:|||:|..:|  .||| .||.:.........|.| |:|.    |||.  :.:.:|
 Worm     1 MLLSIKTSTGKTITVEAPKSVKTEVR-YKQGVVFAVSYDKDAGN-QIIE----MEDT--VQDVKI 57

  Fly    64 AEDKIIVLMGKKKVD------KSSPEEKVAPTPPLAAGPNVLRTEDVVPSLAPNDQWVSDLMSMG 122
            .|.:...|...::|.      ::|...:....|.||..|    .|.|:...|.:.:.|:      
 Worm    58 QEAQQAPLRESEEVTGDPIKVEASDTNRNEENPDLAGPP----AEPVIRGTAASGRIVN------ 112

  Fly   123 YGEEEVRSALRASFNHPERAIEYLINGIPQEVVSEQGLAAIPSVQTSDQLQQLMADLNIT----- 182
                 ||.|.:.......|...||.:            :|:..|.:..|::::..|.|..     
 Worm   113 -----VRLAGKRIVQPNRRFTSYLPS------------SAVRRVASPYQIRRVSVDGNFNVFVKN 160

  Fly   183 ----RMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELM 221
                :...:..:|.:.|..|..::.|.     |....||:.|:
 Worm   161 STGGKTTAVSIKNTDTIGTLKLKVQEK-----EGIPPNQQRLL 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167 53/238 (22%)
UBQ 1..76 CDD:294102 24/76 (32%)
UBA1_Rad23_like 110..148 CDD:270466 7/37 (19%)
XPC-binding 172..227 CDD:286376 10/59 (17%)
UBA2_Rad23_like 245..282 CDD:270467
F52C6.2NP_494128.3 ubiquitin 157..224 CDD:365970 8/47 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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