DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10694 and ned-8

DIOPT Version :10

Sequence 1:NP_651212.1 Gene:CG10694 / 42855 FlyBaseID:FBgn0039147 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001379170.1 Gene:ned-8 / 172910 WormBaseID:WBGene00003587 Length:77 Species:Caenorhabditis elegans


Alignment Length:202 Identity:40/202 - (19%)
Similarity:75/202 - (37%) Gaps:56/202 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 CGGDLAGAAETTVESVNDGKTAAWYMHCYLQ--GIPLDTKPELPLFYTEI--------------- 526
            |||.|....     ..|:|....|: ..:|:  |.|:..   :||.::.|               
 Worm    18 CGGPLIMRL-----YFNNGGKRIWF-STFLETAGFPVIF---IPLLFSYITRRRSNNVGDSTSFF 73

  Fly   527 ---DKVDLSVEVCGV--RFEN---PFGLASAPPTTSTAMIRRAFEQGWGFAVTKTFALDKDMVTN 583
               .::.::..:.|:  .|:|   .:|:|..|.:|:..:|....    .|....:|.:.|...|.
 Worm    74 LIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQL----AFIAIFSFFMVKHKFTP 134

  Fly   584 VSPRIVRGVTAGQHYGPQQGAFLNIELISEKCCDYWLTGIRELKRDFPSRVLI---ASIMCTYSE 645
            .:...|..:|.|       .|.|.:...::|       .:.|..:.:.:..||   |::|..:..
 Worm   135 FTINAVVLLTVG-------AAVLGMHTETDK-------PVHETHKQYITGFLITVAAAVMYAFIL 185

  Fly   646 PDWIELA 652
            | .:|||
 Worm   186 P-LVELA 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10694NP_651212.1 rad23 1..284 CDD:273167
ned-8NP_001379170.1 Ubl_NEDD8 3..76 CDD:340504 13/66 (20%)
Blue background indicates that the domain is not in the aligned region.

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