DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syx1A and SYP121

DIOPT Version :9

Sequence 1:NP_001189276.1 Gene:Syx1A / 42854 FlyBaseID:FBgn0013343 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_187788.1 Gene:SYP121 / 820355 AraportID:AT3G11820 Length:346 Species:Arabidopsis thaliana


Alignment Length:276 Identity:73/276 - (26%)
Similarity:135/276 - (48%) Gaps:40/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MDDFFAQVEEIRGMIDKVQDNVEEVKK--KHSAILSAPQTDEKT---KQELEDLMADIKKNANRV 92
            :|.||..||.::          ||:|:  :.:..||:.....||   .:.::||.:.:..:....
plant    44 LDKFFEDVESVK----------EELKELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVA 98

  Fly    93 RGKLKGIEQNIEQEEQQNKSSADL----------RIRKTQHSTLSRKFVEVMTEYNRTQ----TD 143
            ..|.|.|:..:|..::.|.::..|          |.|.:..:.|.:|.::.|..:||.:    ::
plant    99 LKKAKMIKVKLEALDRANAANRSLPGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRELISSE 163

  Fly   144 YRERCKGRIQRQLEITGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAK--QTLADIEARHQDIM 206
            |||..:   :|...:||...::..|::::..|.|..|.|..|.|..:.:  .|:.:|:.||..:.
plant   164 YRETVQ---RRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVK 225

  Fly   207 KLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQSKARRKK--- 268
            .:|.:::|||.:|:|||:|||.||..:|.||.||..|..:::..|...:.|..||...|:..   
plant   226 DIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTARVYQKNTRKWTCIA 290

  Fly   269 ---IMILICLTVLGIL 281
               ::|:|.:.||.:|
plant   291 IIILIIIITVVVLAVL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx1ANP_001189276.1 Syntaxin 33..230 CDD:395647 55/217 (25%)
SNARE 231..281 CDD:399038 15/55 (27%)
SYP121NP_187788.1 Syntaxin 44..249 CDD:395647 55/217 (25%)
SNARE 217..283 CDD:419871 26/65 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2612
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 116 1.000 Inparanoid score I2016
OMA 1 1.010 - - QHG53912
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 1 1.000 - - FOG0000185
OrthoInspector 1 1.000 - - otm2646
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

Return to query results.
Submit another query.